Microplitis demolitor: 103575034
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Entry
103575034 CDS
T05600
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
mdl
Microplitis demolitor
Brite
KEGG Orthology (KO) [BR:
mdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdl03041
]
103575034
Enzymes [BR:
mdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103575034
Spliceosome [BR:
mdl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103575034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
R3H
Helicase_C
DEAD
Ank_2
AAA_19
HA2_N
AAA_22
nSTAND3
Ank
ATPase
PhoH
Ank_5
AAA_23
T2SSE
DnaB_C
Zeta_toxin
AAA_16
Motif
Other DBs
NCBI-GeneID:
103575034
NCBI-ProteinID:
XP_008552869
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MPRRKNNHWKPVIGEDTRIAVNLCVKKLIESPDLKELEFPSSYTAEERAYIHSLVQELGL
KSKSRGKGANRFLTVYKREGSTIIQSDPVLRIQKTSKQGILNLIQKFPINSKERQDLLPP
TERERTIDNEVVVNAKAMGRLNNSIPQVPQLRTNQELINFRKNLPVYNSRDKIIDALSSS
QVVIIAGETGSGKTTQVPQYILENCQQRNQVCRIICTQPRRLSAVSIAERVAYERDEKIG
QTFGYQIRLESRVAPRTLLTYCTNGVLLRTLMGGDSALATVTHIIVDEVHERDRFCDFLL
IALKDALVKYRSLKLVLMSATMDTNIFVKYFNQCTVINISGRSFDVDTYYLQDILKITGY
MTKEMTSKRKELIHKKDQRKILESWTQCPPQQTSGRLFNNKGVMPSPILGQQSEQVSEKI
ELEPWLAEEMDKSISDAWLSGGEDNFTQLLHLILSENISVDYQHSITRVTPLMVAAGRGS
INTTEQLLNLGANLTIRASNEWTALDWARKMNQVECAELIEAYMKTYDYSLDERDTGQDA
PLTEEEKLILDIYHNTFNDDNVDYNLLLLLILHIHTSMPSGSILVFLPGYDDIVTMREKI
TTEEKRLSAGLRITLFVLHSNMQMSDQKRLFRPCPPGTRKIILATNIAETSITIDDVVYV
IDSGKVKEKSFDAISNVCTLKSNWISQACAKQRKGRAGRCQNGICYRLYSTIRYNSMQPY
QTPEILRLPLQELCLFTKHLAPGNTPIAEFLERALEPPSNMITRNAVQLLKSIDALDAWE
DLTELGTHLLDLPVEPRLGKMLLYAVVLKCLDPILTIVCSLAYKDPFVLPHQPCQKRAAT
AVRKKFSADTYSDHMAVLRAFQAWQQARASGWERQFCEKNFISSAVMEMIVGMRTQMLGQ
LRASGFVRARGTGDIRDINLNSENWAVVKAALTAGLYPNLIRVDREYGQLRTQKESKVFL
HPSSTLRDFSKSARTTSAQSHAAGVTGLPSDWLVYEEMSRSGRFCHVKTVTLVNPVTIAL
FSGPARLPMDLIYDTETVPESESDSEAEDSREGMTILRLDDWIALKVDYDTAKLVLYLRQ
KWNALFLRRMKTPNKNMTQLDELVIKSIVSIISNEEHACDLQQPTGIGQRPRPLIVDYYP
ANARRTDEDDKFLN
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgccgagacgtaaaaacaatcattggaaaccggtgataggtgaagacacacgtattgct
gtcaacttgtgtgtcaaaaaattaattgaatcgccagatttaaaggaactggagtttcca
tcatcatatactgctgaagaaagagcttatattcatagtttagtacaagaattaggtctt
aaatctaaaagtcgtggaaaaggagcaaatcgttttctgacagtatataaaagagagggc
tcaacaataatacagtcagatccagtgctgagaattcaaaaaacatcgaaacaaggaata
ttaaatttaatacaaaaatttccgatcaatagcaaagaacgtcaagatttattgccgcca
actgaacgtgaacggactattgataatgaagtagttgtaaatgcaaaagcaatgggacgt
ttaaacaacagtatccctcaagtacctcaacttcgtaccaaccaagagctgattaatttt
cgtaaaaatttaccagtttacaactcccgtgataaaataatcgacgctttgtcatcaagt
caagtagtaataatagcaggggaaactggttccggtaaaacaacacaagttccgcaatat
atattagaaaattgtcagcagcgcaatcaagtatgccggattatttgtacgcagccacga
cgtttgtcagcagtatcaattgctgagcgcgttgcttatgagcgtgatgagaaaatcggc
cagacattcggttatcaaatacgattagaaagccgtgtcgcgcctagaacactgttaact
tactgtacaaatggtgttttattgcgaacactgatgggtggtgactcagccctggctaca
gtaactcatattattgttgacgaagtacacgaacgtgatagattctgtgatttcttactt
atagctttaaaagatgctttagttaaatatcgatcacttaaactagtacttatgagcgcg
acaatggacactaatatatttgttaaatacttcaatcaatgcactgtgataaacattagc
ggtaggagttttgatgtcgacacatattacttgcaagatattttaaaaataaccggttat
atgaccaaagaaatgacgtccaagcgtaaagagttgatacacaaaaaagaccagcgtaaa
atattggaatcatggacccagtgtccgcctcagcagaccagtggccgtctttttaacaac
aagggtgttatgccctcgcctattttaggtcagcaaagcgagcaagtgtctgagaaaata
gaattagagccttggttggctgaagaaatggacaaaagtatttccgatgcatggctcagt
ggtggagaagacaattttactcagttacttcatttaattttgtcggaaaatatttccgtt
gattatcagcactcaataacgcgggttactccgctgatggtcgccgcaggacgtgggtct
atcaacacaaccgaacaattattgaatctcggtgctaatttgacaatacgcgcaagtaat
gagtggactgcattagactgggcgcgtaaaatgaaccaggtcgagtgcgcggaactgata
gaagcttatatgaaaacttacgactacagtctcgatgaacgggacactggacaagacgct
ccgctgactgaagaagaaaaattgatccttgatatttatcacaacacattcaatgatgac
aatgtcgattataatctcctgctacttctcattcttcatattcatacttcaatgcccagt
ggatctattctcgtatttttacccggctacgatgacatcgtaacaatgcgggaaaaaata
acgaccgaagaaaaacgtttgtctgcaggcttacgaataactttatttgttttacattcg
aacatgcagatgagcgaccagaaacgtctgttccgaccttgtccaccgggaacacgtaaa
ataattctcgcgacaaatatcgctgagactagtatcactattgacgacgtagtctacgtc
atagactcaggaaaagttaaagaaaaatcatttgacgcaataagtaacgtgtgtactctt
aaatcaaactggatatcacaggcctgtgctaagcaacgcaaaggacgggccggaagatgt
cagaatggtatttgctatcgtctttactcaacgattcgctacaacagcatgcagccatac
cagacacctgagattctccgcctgccgctccaagagttatgtctgtttacaaaacatttg
gctccgggtaacactccgattgctgagttccttgaaagagctctggagccaccttctaac
atgataacacgcaatgccgtccagttgctcaagtccattgacgccttagacgcatgggaa
gatcttactgaacttggtacccatcttctggatctaccagttgagccacgacttggtaaa
atgctgctttacgcggtggtactcaagtgtttggatccaattttgacaatagtctgtagt
cttgcttacaaagatccatttgtgctgccgcaccagccgtgtcagaagcgagctgctaca
gcagtacgtaaaaaattttcagctgatacatacagcgatcatatggcagtactgcgagca
ttccaagcctggcaacaagcccgcgccagtggctgggaacgtcagttttgtgaaaaaaat
tttatatcatcggctgttatggaaatgattgttggtatgagaacacaaatgttgggacaa
ttacgtgcttcgggtttcgttcgtgcacgtggtactggtgacatacgtgatataaatctc
aattcggaaaattgggctgttgttaaagcagcattaactgctggattgtatccgaacttg
ataagagtcgatcgcgagtatggacaattgagaacacagaaagaatctaaagtattttta
catccatcctctactttgagagatttttcaaagtctgcgagaacaacttctgcgcaatca
catgccgctggagtcacgggattaccctctgattggctggtttatgaagaaatgagccgc
tcgggaagattctgtcatgtaaaaactgttactctagtcaatccggtgacaatcgcattg
ttcagcggaccagcgcgactgcctatggaccttatttatgacacggaaactgtacctgaa
agtgagtcggactcagaggctgaggacagccgcgaaggaatgactattttgaggctcgac
gattggattgcattgaaagtagactatgatactgctaagctggttctttatttgaggcaa
aagtggaacgcgttgttcttgagaagaatgaaaacgccgaacaaaaatatgacacagcta
gatgagttagtgataaaaagtattgtctcgatcatcagcaatgaggaacacgcttgcgat
cttcaacaaccaacgggaattggtcagcgcccgagaccgcttatcgttgactactatcct
gctaatgctcgtagaactgatgaagatgacaaattcctgaattaa
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