Microplitis demolitor: 103577908
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Entry
103577908 CDS
T05600
Name
(RefSeq) uncharacterized protein LOC103577908
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mdl
Microplitis demolitor
Pathway
mdl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103577908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdl03021
]
103577908
03019 Messenger RNA biogenesis [BR:
mdl03019
]
103577908
Transcription machinery [BR:
mdl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103577908
Messenger RNA biogenesis [BR:
mdl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
103577908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_helical
CID
zf_PCFS4
Pcf11_C
Motif
Other DBs
NCBI-GeneID:
103577908
NCBI-ProteinID:
XP_008557004
LinkDB
All DBs
Position
Unknown
AA seq
1858 aa
AA seq
DB search
MTKMASTKSKEIVEEYSSSLSDLTINSKPLINMLTMLAEDNVDHASAIVKAVENHLLKVS
SDVKLPVLYLIDSIVKNVSGAYLKLFTDNIVSIFCNVFEKVDESTRLSMWKLRQTWGEVF
PAKKLFTLDVHVRNIDPAWPVPNAPLSSGSIHFNPRFLNVPSTPTPAAPTPAVLPGNKVP
SVESTTVNEAVMREQLLKKQKELLELQKQKIELELLQAKTSLEQQQKQTALVKTESLISA
PIIPEVAEEKPVIAAVSNLATKQVAKQFPAAAASLLKNVGTNNGPRIAPASSLLVASARP
VSRDPRIKLPPGSEQQSCDIDSRLRQSTLSSLSSLTSDLPSKTQLSKNQHAALNTVLSDH
VIKQQLLTKQAMNHISESNQSGGGLKSSSSSSLASNNSSSRGVGSGGSGLGGTGGSETKS
KDTKNSSSRGSSSVSSTKDDKSFASSKSSSSHRKLGNRSRSNSKQSQVSPTKSTSSSKII
DRDASPIRSKSREKDNSDTSSSTSLRSSPNKSSSPISKNRKKSSSKSRKRTPSPPYKIPR
RNNDSKSSNLSNLTSSLSSSSSSLSGLVSSAVGLTEEEQSGSLIVSPPHPPTFKEIRPNT
RQRNYIKRNNKDLGSHSPDNNSSQDLSNTQVTSDVLIQSAASKDEDLRAVLPPPASIVVP
PIAETKEDLDLRILAPPPSNKRQSSEHGDSNNKKSKTEKFDTLFGNEDVDLRTLTNPKAG
RPPTPPPPVISGEENKTSWAKLKTTFKNDRDKPTTSDDKRDRDRNKDRSSRGRPYNKPSE
DGVKDRRRPFINDDDSRSSGRRNRDFDKSDRNSERNIEIIMKQAEEQRKQGSISEADYTT
LIQEVWQMNEDQKLRAAQRKDREVGASVWEKGIDIGGFSPKDDMGHRGKDHPHSRNGPRW
QPPGPWQPPGPWAPPPGPTFGNPFNPDFRAMGPWQNPRQFGPMRPDFNQFHGFNSGMGPR
MGPGLMGPMGPNGPMMPGMMPNGPMGPLGLPNPAMANMNGPPSLLLNGPHPPHNNLLTHV
PPPSRNISPNSMSKFDNEETQNFMDKLTKEHGGPSRELPLPDPKLLEEIANDTMKSINID
NIPREIRYYGQTAVVFMSWDDPREIGFQNGSRRIMIDDKDTITCSFNEPYKEFMYDGKVH
RIRLGAPTRELFVDDKWYECYFGGPPVLVDLGNKKVNLKLEGPPPQVKIGTIKRTDLVIG
KINLIINAKNMTPVFVDSKPQMFEIDNQPQTLEFADSLETILLNGRPFKVEFGGLPKPIV
VRDKKHFIRFTVLPRGAHPGSVKIAGMKGKCPESSAADNNKPSDSTLPIPGVVNSEPDST
SQDASDVSLAKPDLQLDMLSSALSSAMAPSSGLSYQAEPMEKPAAPAPTPILPLNLNLNE
LYQRLVDTGIVPRKGPKVEVKKPEEEVKKEPEIAPASLDKPETLKIVRPIGSTSMYGGMQ
CSSCGARFAPELATRYSHHLDWHFRQNRRGRDSTKKAQSREIMYEISDWNQFEEIEDLDD
RVQSWFETERQSAETERANGEDSSQDAIQPSVPTSSNNDIRCQVCHDDFDQFYNEEKDEW
HLRPAVSFEDKNYHPLCLEDHKRYLEKSALNESIIEDEDNKDEVRDEDSIEYLKDEDMPE
LDANDEQVEAEEKIEEKEELKDDSTIEEVSEDTKDNVDEKMVIDNVEDEKEIKEGDVNED
VTDKLQVSEQPEEQEVKFDNAKPDEMVTESLDIDVKVKEEPMDVNETEINWDNVEVKTEP
VDTEPEPEETKVAEIGAVVDTTLTAVTSSLDGNVELESTPATLPTASTRIKINISKPLVN
REPEEPKEKPPAPKAPSEEVEEIILKPKAIKASLKGRKLSTLPPVQRGQELSGLCSIM
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaatggcgtcaacaaagtcgaaagaaatagtggaggagtacagttcgtcgctt
tcagacttgacaattaacagcaagcctcttataaacatgcttacgatgttagcagaggac
aatgttgaccatgcatcggccatcgtcaaagcggttgagaaccacttgttaaaggtttca
agtgatgtcaaactaccggtcctttatctcatcgactcgatcgtcaagaatgttagtgga
gcttatttaaaactcttcactgataatatagttagcatattttgtaatgtctttgaaaag
gttgacgagagtacaagattgagcatgtggaaattgcggcaaacgtggggtgaagtattc
ccagcaaagaaactatttacactggatgtacatgtccgtaatatagacccagcgtggccg
gtaccaaatgcgcctctttcgagtggttctattcactttaaccctcgttttttgaatgtg
ccctcgactccaacgccagcggcaccaacacctgcagtactacctggtaataaagttcct
tctgtggaatcaacaactgtaaatgaagcggtgatgcgtgagcagttactcaaaaaacaa
aaagagcttcttgagttacagaaacaaaaaattgagttggaattactgcaggctaaaacg
agccttgagcagcaacaaaaacaaactgctttggtcaaaacggaatcgttaatatcggca
cccattattccggaagttgctgaagaaaagccggtaattgctgcggtatctaatctagca
accaagcaagttgcaaaacagtttccagcagccgcagcctcgcttctgaagaacgtgggt
accaacaatggcccccgaatagcaccagcaagcagtctactggtagcatcagcacgtcca
gtgtcacgtgaccctcgtataaaactccctccaggatcggagcagcagagctgtgatata
gactcccgtctgcgccaaagcaccttatcatcgttgtcatcattaaccagcgatttaccg
tctaaaacacaattatcaaagaatcaacatgccgcgttaaacactgtactttcagatcac
gtaataaaacagcaattattaacgaaacaagcaatgaatcacataagtgaatcaaatcaa
agtggtggtggccttaagtcatcatcgtcatcttctctcgcgtcaaacaattcttcaagt
cgtggtgttggtagtggtggaagtggattaggtggaactggaggaagcgagacaaagtct
aaagacactaagaactcgtcgtcacgtggcagttcttcagtgtcttcaacaaaagatgat
aagtccttcgcttcctcaaaatcctcctcgtcacacagaaaattaggcaacagatcccgg
tcaaattcaaaacaatcgcaagtatcacctactaaatcaacatcatcatctaaaataatt
gatcgagatgcaagtccaattaggtcgaaatcccgtgagaaagataactctgacacctca
tcatctacatccttacgttcatcacccaataaatcctcatctcctatctcaaagaaccgt
aagaagagtagtagtaaatcgagaaagcgtacacctagtccaccttataaaattccccga
agaaataacgattcaaagtcatctaacttgtcaaatttaacctcctctctgtcatcgtca
tcctcctcgcttagcgggctggttagtagcgcagttggtcttactgaggaagaacagtca
ggttcgttaattgtctctcctcctcatccgcctacttttaaagaaatacgaccaaatacc
agacagagaaattatattaaacgcaacaataaagatcttggcagtcatagtcctgataat
aattctagtcaggatctttcaaatactcaggttacgtcagatgttttaattcaatcagca
gcaagtaaggatgaggatttaagagctgtactcccgccaccggccagcatcgttgtcccg
ccaattgctgaaacaaaagaagacttagatttgcgtatattagcaccaccccctagtaat
aaaagacaaagctccgagcacggcgattcgaataataaaaaatctaaaactgaaaaattt
gatactttgtttggtaatgaagatgttgatttacgaacactgacaaatcccaaagctgga
cgaccaccaactccaccgccgccagtgatatcaggtgaagaaaataaaacaagctgggca
aaattaaagacaacatttaaaaatgaccgtgataaaccaacaactagtgacgataaacgt
gacagagatcgtaataaagatcgttcatctagaggccgaccgtacaataaaccatccgag
gacggtgttaaagatcgtcgacgtccatttataaatgacgatgattctcggtcatctggt
cgtagaaatcgtgactttgataaatcggatcgcaattcggagcgtaacatcgagataata
atgaagcaggctgaagagcaacggaaacaaggttctatttctgaagctgactacaccacg
ttgattcaagaagtctggcagatgaacgaagaccaaaaattgagagcagcacaaagaaaa
gatagagaagtgggtgcaagtgtttgggagaaaggaattgacattggaggtttcagtcca
aaagacgatatgggacaccgagggaaagatcatccgcactcgcgaaacggaccacgctgg
caaccaccaggaccttggcagcctccaggtccttgggcacctccacctggaccaacattc
ggcaatccatttaaccccgatttccgagcgatgggtccttggcaaaatccacgacaattc
ggaccaatgcgacctgacttcaatcaatttcacggtttcaactcaggcatgggtccacgt
atgggtcctggtttaatgggacctatgggtcctaatggccctatgatgccaggaatgatg
ccaaatggacctatgggaccactgggtctaccaaatcctgccatggctaatatgaatggg
ccacctagtcttttattgaacggccctcatccgcctcacaataatttattaactcacgtt
ccgccaccttcaagaaacatctcgcccaactcaatgtccaagtttgacaatgaagagaca
caaaactttatggacaaacttactaaagaacacggcggtccaagccgcgaactacctcta
cctgacccaaaattattagaagaaatagccaatgacactatgaaatcaataaacatcgac
aatatacctcgtgaaattcgttactacggtcaaactgctgttgtatttatgagctgggac
gacccaagagaaatcggtttccaaaatggttcaaggaggataatgattgatgacaaagac
accatcacctgttcgttcaacgagccttacaaggagtttatgtacgacggcaaagtccac
aggataagactcggtgcgccaacgagagaactgtttgttgatgacaaatggtacgaatgt
tacttcggtggcccgccagtgctagttgacttagggaacaaaaaagtaaatcttaaatta
gaaggaccaccgccacaggttaaaattggtacgataaaacgaactgatttagtcataggt
aaaataaatcttattattaatgctaagaatatgactccggtatttgtggattcgaagccg
cagatgtttgaaatagataatcagccacagacacttgaatttgctgattctctggaaacg
atattgctcaatggcaggccatttaaagttgaatttggtggattacctaaaccaattgtt
gtaagagataaaaaacatttcataagatttactgtattaccacgaggagcgcatccggga
tctgttaaaattgctggtatgaaaggcaagtgtccagaatcatctgctgctgataacaac
aaaccaagtgattctactcttccgattccgggagttgttaactctgaacccgactcgact
tcacaagacgcgtcagatgtctcattggccaaaccagacttacaattagatatgttgtct
tcggcgctttcctcagcgatggcaccctcttctggtttatcttaccaagccgagccaatg
gaaaaacctgcagcaccagcaccaacgcctattctgccgcttaatctcaacctcaacgag
ctctatcaaaggctagtcgataccggaatagtgccaagaaaaggacccaaagtcgaggtg
aagaaacctgaagaagaagtcaagaaagaaccggaaatagcaccagctagcttagacaaa
ccagagacgcttaaaatagtacggcctattggttcaacttcgatgtacggtggaatgcag
tgcagctcatgtggtgcgaggttcgctcccgagttagctacccggtacagtcatcatcta
gactggcacttccggcagaaccgacggggcagagattcaaccaagaaagcacagtcgcgt
gaaatcatgtacgaaataagtgactggaatcagtttgaagagattgaagacttggatgac
agagtacaaagttggtttgaaaccgagagacagtctgcggaaacggaaagagccaacggt
gaagattcatcacaagacgcaatccaaccaagtgtgcctacaagcagcaacaatgatatt
cggtgtcaagtctgtcatgatgattttgatcagttttacaacgaagaaaaagacgagtgg
catttgagaccagctgttagcttcgaggataaaaattaccacccactttgtctcgaggat
cacaagcgctacttagaaaaatcagcattgaatgagtctattattgaggatgaagataac
aaggatgaagtaagagatgaagattcaatagagtatttgaaagacgaggacatgccagag
cttgatgctaatgacgaacaagttgaagccgaagaaaaaattgaggaaaaagaagagctc
aaagatgacagtacgattgaggaagtgtctgaagacaccaaagataatgttgacgagaaa
atggtaatagataatgttgaagacgagaaagaaataaaagaaggtgacgttaatgaagat
gtcactgataaattacaagtttctgagcaaccagaagaacaagaagtcaagtttgataat
gctaaacccgatgaaatggtgacagagtctttggacattgatgtcaaagtcaaggaagag
ccaatggatgtcaatgaaacggaaataaactgggacaatgttgaagttaaaacagaacca
gttgatactgagcctgaacctgaagagactaaagtagcggaaatcggggcagtggtagat
acgacccttactgcagtaacgagttcactggacggcaacgttgaattagaatcaactcca
gcgacgctgcccactgcgtcaacgcgaataaaaataaacatctcgaagccacttgtaaat
agagaaccagaggaaccgaaagaaaaacctccagcacctaaagcgcctagtgaagaagtt
gaggaaataattttaaagcccaaggcaatcaaagcatcactaaaaggtaggaaactttct
accttgcctcccgttcaaagaggccaagaactctcggggctttgttcgataatgtaa
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integrated database retrieval system
