Microplitis demolitor: 103578136
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Entry
103578136 CDS
T05600
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
mdl
Microplitis demolitor
Pathway
mdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103578136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdl03019
]
103578136
Messenger RNA biogenesis [BR:
mdl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
103578136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lipase
DNA_pol_A_exo1
PMC2NT
HRDC
Abhydrolase_6
Abhydrolase_1
DUF4274
Motif
Other DBs
NCBI-GeneID:
103578136
NCBI-ProteinID:
XP_008557327
LinkDB
All DBs
Position
Unknown
AA seq
1353 aa
AA seq
DB search
MGENEKEKLINENQSEKNSQTPKTMEKLFPEFESFDDYVKAGFSSVGNGIKASNSLPKGE
NFQYYSCFSAFKNFRIKQTKKIENLMQMIVARTGVAGSMTARDTEEKFKLLIDTNDILLD
RTSVLLDEEAGIKRNPGVELIVTSTKNNCGSWNTSTSTPSPKSSDTTNAQAIRLLAAKNV
QRPQLSFKDKIDNSSKPWEPRIKDKPNSLKPLGIYLIDGENGQVFCHPYDFELDRFSPPE
KQLMKIKPVKYKPLDETPLIMIEKPEDLQIMLKDLEKYDEIAIDLEHHSYRSFLGITCLM
QISTRDTDYLVDTLSLRSELHILNEIFTKPSVLKVFHGADLDIQWLQRDLSLYIVNMFDT
HQAAKHLNLPYLSLAYLLKTHCNVDPNKHFQLADWRIRPLPKELIKYAREDTHYLLYIKD
ILQNALIDSANGQTNIIKAVYDRGVDICKKIYEKPLCDETSCMNMYRKSQKMFNNKQLYA
LKELFMWRDATARQEDDSTGYVLPNHMLLNIAETLPREMQGILACCNPIPPLVRQNLLKL
HKLILKAREQPLIKLVLQQEIRPRVNLNNQAADSDIWMWSPHDNMSGDEVQANLPCLIND
DDDNEGSNIDTSSKLNFKSSKQNDKAKHQVTVFDSPINSDDEGSTSTKAKLLKAKKLFVS
PFQRYKLVIPMIAALEEEERKRKEDEEKRKAEIEKRLADADTEDTAKHIERVREHFLNVV
NAKQEKKAAKESKDNLQVPLSSIPGTKKRKRDIEEDKKNVKVDKTLDYTTPAPASTGKVV
VNPLKKRQRNDSDDDDVDDCRQKKSPKLSKKQKKAMNNSVNNSGDSVKGLTAFSNSNLKR
KAQKSANRQELEQKGMLPKKNFNYKEVDFSSFQGGSKTSTAKSAPFIQQQNKDKRKKGKG
KYRVENIYFNRQINFRRIKMKLYLLILLFFVLNNLKVSISSNQTNIYNHNNTKAVNGTVT
ERKIFPVWPNGTKISFPATVYKRLFKGGEVDCFGLGSTIAIALDWVFQPGSSHTHELDIQ
FTLTSRKKPHRVHVLTGNQFGLEWTDFKIERKTVIIVHGFLSDGEMSWIREMDEAYRLLE
DVNVVTVDWSAHGNTWNYYKAAVHTRFVGREIAKLLSHIVNATEAESPGSSKSSWGPIHM
IGHSLGAHICGVAADEFKKITSAWRITRITGLDPAQPCFTNSSLSLDVTDAPFVDIIHTN
GQLMSRLGLGLPQPIGHVDFYPNGGKAQPGCVRNYGSSLNFLNLPKHVINEAICSHGRSY
VYFTESINAALLKDGSFWAHTWDGSYRRAVKSLNETCDSNTCSEMGINAPNYSTRGSFFV
VTSSSKPFYYIDARDLSHLAEQLQNDFRDEYLD
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaaatgaaaaagaaaaattaataaatgaaaatcaaagtgaaaaaaattcacag
actccaaaaactatggaaaaattatttccggaatttgaaagtttcgatgactatgtcaag
gcggggttcagtagcgtgggaaatggaatcaaagcatcgaacagtttgcccaagggagag
aacttccaatactactcgtgtttttcggcattcaaaaacttcagaatcaaacaaactaag
aagattgagaatttaatgcagatgatcgtagcgaggactggagtcgctggcagtatgaca
gctcgggacactgaagagaaatttaaactactgatagacaccaatgacattctgttggac
cgcacgagtgttctgctagacgaagaggcgggaataaaaagaaaccctggtgtcgagttg
atagtgacctccaccaaaaataactgcgggtcttggaacacgtctacctcaactccgagc
cctaaatcttcagacacgacaaatgcgcaggcaataagactgctcgcagctaaaaatgtc
cagcgacctcagttgtctttcaaagataaaattgacaacagttcaaagccctgggagccg
cggataaaagacaaacccaacagtttaaagccgcttggaatttatttaatcgacggcgag
aacggtcaagtcttttgtcatccctacgattttgaactcgatagattttcccctcctgaa
aaacagttgatgaaaataaagccagttaagtataagccacttgatgaaactcctctgata
atgattgagaaacccgaagatttgcagataatgctcaaggatctagagaaatatgacgag
atagcaattgatttagaacatcattcctaccgttcattcttggggatcacttgtctcatg
caaatatcaacaagagacactgattatctagtggacactctttcactacgatcagagtta
catattttaaatgaaatattcacgaaaccatcagtattaaaagtatttcacggagcagac
ctagacatccagtggctccaacgtgacttgtcgctctacatcgtcaacatgttcgacact
caccaagcagccaaacacttaaacttgccctacctcagcttggcttacttgttgaagact
cactgcaacgtggacccgaacaaacacttccagctcgcggactggcgaatccggcctctg
cccaaagagttaattaaatatgcgcgtgaagacactcactacttactctacatcaaagac
attttgcaaaacgctttgattgattccgcaaacggtcagactaacatcataaaagctgtt
tatgaccgtggtgttgatatttgtaaaaagatttacgagaaaccgctttgcgatgagacc
agctgcatgaatatgtaccggaagagccagaagatgttcaacaacaagcagttgtatgca
ttgaaggaattattcatgtggagagacgctacagcgaggcaagaagacgacagtactggt
tatgtcttgccgaaccacatgctgctcaatattgctgagacgttgccgcgtgaaatgcag
ggtatacttgcctgctgcaatcctattccgccgctggtgagacagaatttgttgaaactt
cataagttgattcttaaagcgagagaacagccgctgattaaattagtgctgcagcaggaa
ataagaccgcgagttaatttaaataatcaggctgctgattctgacatctggatgtggtcg
ccgcatgacaacatgagtggagatgaagttcaagcaaatttaccctgtcttattaatgat
gatgatgataatgaaggcagtaatattgacaccagtagcaaattaaattttaaatcatca
aaacaaaatgacaaagcaaaacaccaagttactgtttttgatagcccgattaattctgat
gacgaaggctcgacgagtaccaaagcgaaacttttgaaagctaagaaattatttgtcagc
ccgttccagaggtacaagcttgtaatacccatgattgcggcgctggaagaagaagaacgc
aagaggaaggaagatgaggagaaacgaaaagctgaaattgagaaaagactggctgatgca
gatactgaagacactgccaagcacatagagcgggttcgtgaacattttttgaatgttgta
aatgcgaaacaagaaaaaaaagctgcaaaggagtctaaggacaatcttcaggtaccactg
agctcgatacctggtacgaagaaaaggaaacgagacattgaagaggataaaaaaaatgtt
aaagttgataagacgcttgattacacaactccggcacctgctagtactggtaaagttgta
gttaatcctttgaaaaaacgtcagaggaatgatagcgatgatgatgatgttgatgattgt
cgccagaaaaagtctcctaagttatctaagaaacagaaaaaagcgatgaataattcggta
aataattctggtgattctgttaagggattgactgctttctctaattctaatttgaagcgg
aaagcacagaagtctgcaaatcgccaagagctggaacaaaagggcatgctgcctaagaaa
aattttaattacaaagaagttgacttcagcagctttcaaggtggtagcaaaactagtact
gctaaatctgcgccgtttattcaacaacagaacaaagacaagagaaaaaaaggaaaagga
aaatatagagtagaaaacatttatttcaacagacaaataaattttagacgcatcaaaatg
aagttgtatttattaatattattgttttttgtactcaataatttaaaagtcagtatcagt
agcaaccagacaaatatttataatcataacaacaccaaggccgtcaatggaaccgtgact
gagcgtaaaatatttccggtatggccgaatggtacaaaaatcagttttcccgcgacagtt
tataaaagattatttaaaggcggggaagttgattgtttcggactcgggtcaacgatagcc
atcgcactcgactgggtattccaacctggtagttcacatactcacgagttggatattcaa
tttacgttaacgtcaagaaaaaaacctcatcgagttcacgttttaacgggaaatcaattt
gggcttgagtggacggactttaaaattgaacgtaagacagttatcatcgtccatggattt
ttatctgatggagagatgtcctggatacgagaaatggacgaagcgtatcgtctattggag
gatgttaacgtggtgactgtagattggagtgcccatggtaacacctggaattattataaa
gctgccgtacatacaagatttgtaggtcgcgagatagccaaacttttatcccacatcgta
aatgctacggaggcagagtctccagggtcttcaaaaagtagctggggtccaatacacatg
atcggacacagcctgggcgcgcatatctgcggagtagcagccgatgaattcaaaaaaata
acatcggcatggagaattacgcgtataactggactggatccagctcagccgtgttttaca
aacagcagtctctcactagacgtcaccgatgctcctttcgttgatataattcacacaaac
gggcaactgatgtctcgactcggtctaggtcttcctcaaccgatcggccacgtagacttt
taccccaacggaggtaaagctcagcccgggtgtgtcagaaactatggatcgtcacttaat
tttcttaatcttccaaaacacgtgataaacgaagcaatttgtagtcacggccgctcatat
gtttatttcaccgagtcaataaacgcagcgttgttgaaagatggatcattttgggcccac
acgtgggacggatcatacaggagagctgtaaagtcgctgaatgaaacctgcgattcaaat
acctgcagcgaaatgggaataaatgcacccaattattcaactcgcggctcatttttcgtc
gtcacttccagctcgaagcctttctactatatcgatgccagagatttgtcccatttagcg
gaacaactgcagaatgatttcagagatgagtatctagattaa
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