Microplitis demolitor: 103578704
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Entry
103578704 CDS
T05600
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
mdl
Microplitis demolitor
Pathway
mdl03008
Ribosome biogenesis in eukaryotes
mdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103578704
09123 Folding, sorting and degradation
03018 RNA degradation
103578704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdl03021
]
103578704
03019 Messenger RNA biogenesis [BR:
mdl03019
]
103578704
03009 Ribosome biogenesis [BR:
mdl03009
]
103578704
03016 Transfer RNA biogenesis [BR:
mdl03016
]
103578704
Transcription machinery [BR:
mdl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103578704
Messenger RNA biogenesis [BR:
mdl03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
103578704
Ribosome biogenesis [BR:
mdl03009
]
Eukaryotic type
Pre-60S particles
RNases
103578704
Transfer RNA biogenesis [BR:
mdl03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
103578704
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC_4
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
103578704
NCBI-ProteinID:
XP_014299681
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIIECIEQKPINADGVQVPINTTEPNPNGVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
ASKETNEKIIEMNRIRSELALKGAYLPPEKPKEDHFDSNCITPGTPFMARLSACLHYYIH
ERLNNDPGWRGIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIML
GLATHEPNFTIIREEFKPNKPRPCDICGQLGHEMKDCTGAEPDQAKEVMAFGSECAFIFV
RLNVLREYLERELQMPNLPFKYDFERAIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLV
NLYKKTVYKTGGFLTDSGDVNLDRVQLILSDLGEAEDEIFKKRQANEIAFKQREKSKKRR
LEAISNFKPSWIPTGQFAPTMLGQDVKPVQNARHEAYQMRMQGRNYNTSSTERALGTVNA
ATGLQAMMVPENQKNFGTKRKREDSDEEEEDYQANDEVRLWEDGFKDRYYESKFDVKSEN
LEFRNNVALHYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFVNINGLSTEFEKGTVP
FRPLEQLMGVFPAASSSHVPKPWASLMSDPKSPIIDFYPEDFKIDLNGKKFAWQGVALLP
FVDEVRLFKALEPYYECLTEAEKKRNVKGDDRLYIGPGNSGYDLIKGLYKNKVDFNTETE
ISIDGMRGTVLLAEDCVNEGGTLPSPVNGLPVRNNQVYCVRFRDPMFSSHHIFPAKRLKG
VKEPPRVLKPQDFEQMHNRDGKNPWVPRTGFSAPTQKALLGDPGHRMLGHHLNRNQGQYS
AVPAPQNSYNQPRGYSSGYQTSSGQSGYSSYSGNNLGNNSGHRQNYQPRNNTGPWSTGYG
MPNAQYQPRYQQSNQQQYMHHQNSYRNNLNHHQGSGNYSSNYNQDRNKQYNQYGGGGGNR
RNR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccagcattctttcgttggttaagccgtaaatatccatcagtaattatagaa
tgcatcgaacaaaagccgataaatgcggatggtgttcaagtaccgataaatacaacggag
ccaaatcccaatggagttgagtttgataatttatatctggatatgaatggaattattcat
ccttgcactcatcctgaggacaagccagctccaaaaaatgaggatgaaatgatggaggcg
atttttgaatgcattgatcggctgtttcgtattgtgagaccaagaaaacttttgtacatg
gccattgatggtgtagcgccaagagctaaaatgaaccagcagagatctaggaggtttcgt
gcatccaaggaaacaaatgaaaaaataattgaaatgaatcgaatccgctcggagttggct
ttaaaaggcgcgtatttgccgccagaaaaacctaaggaagatcactttgacagcaactgt
attacacctggtaccccatttatggcccgattatcagcttgcttacattactatatacat
gaaagattaaataacgatccgggatggagaggcataaaagttatcctgagtgatgccaat
gtacctggagaaggagagcacaaaataatggattttatcagacgacaaagggcacaacct
gatcacgaccctaatactcaacatgtattatgtggagctgacgcggatttaataatgtta
ggactggcaactcacgagcctaattttacaatcatcagagaagaattcaagcccaataaa
ccacgaccatgtgacatctgtggacaactgggtcacgaaatgaaagattgcactggagca
gaaccagatcaagccaaagaagtgatggcatttggatccgagtgcgcattcatcttcgtg
cgattgaatgttttgcgtgaatatttagaacgggaattacagatgccaaatttacctttt
aaatatgacttcgaacgcgctattgatgactgggtatttatgtgtttctttgtaggaaat
gatttcctaccgcacttaccctcacttgaaataagagaaggcgcaatagatcgacttgta
aatttgtataagaaaacagtttacaaaacaggtggatttctaaccgacagcggtgacgtt
aatttggacagagtccaattaattttatcagatttgggtgaagcggaagacgaaattttt
aaaaaacgacaagctaatgaaatagcttttaaacaacgtgaaaaatctaagaaaagacga
ctggaagctatcagcaattttaaacccagctggataccgactggtcaattcgccccgact
atgctgggtcaggacgtcaaacctgtacagaatgctcgacatgaagcctatcaaatgcgt
atgcaaggtcgtaattataatacgagttctactgaacgcgcacttggtacagtcaatgca
gcaaccggattgcaagcaatgatggtgccggagaatcagaagaactttggaaccaaacgt
aaacgcgaagactctgacgaagaagaagaagattatcaagcgaatgatgaagtgagactg
tgggaagatgggttcaaagatcgttactatgaatctaaatttgatgtcaagtcggaaaat
cttgagttcagaaataatgtagcgcttcattatgttcgtgggttatgttgggtcttacgt
tactattatcagggatgcgcatcatggaaatggtattttccttatcactatgctccattt
gcaagtgattttgtaaatatcaatggtctttcgacagaatttgaaaaaggaacggtgcca
tttcgtccgttggaacagttgatgggtgtatttccggcggctagtagcagtcatgttccg
aaaccttgggcgtcattgatgagtgaccctaagtcaccaataattgacttttatccagaa
gattttaaaatagatcttaatggtaaaaagtttgcttggcagggtgttgctttgttacca
tttgttgatgaagtgagattattcaaagcattggaaccttattatgagtgtctaactgaa
gctgaaaaaaaacgtaacgtgaaaggtgacgacagattgtatattggtcccggtaattct
ggatatgatttaataaaaggactgtataaaaataaagtagattttaatacagagactgaa
atatcaattgatggaatgcgaggtactgttttattagccgaagattgtgtgaatgaaggt
ggtactttaccttcacctgtcaacggcttaccagttcgaaataatcaagtttattgcgta
agattccgtgaccccatgtttagcagccatcatattttcccagctaaacgactaaaaggt
gtaaaagaacctcctcgtgtgttaaaaccacaagattttgagcaaatgcataatcgtgat
ggtaaaaacccatgggtaccaagaaccggtttctcagcaccaactcagaaagctttgctg
ggtgatccaggacaccggatgcttggacatcatcttaacaggaatcaaggtcaatattca
gcagttcctgctccacagaattcatacaatcagccgcgtggttattcaagtggttatcaa
acatcgtcaggccaaagtggttattcgagttattccggtaacaatttagggaataattct
ggtcatcgtcaaaattatcagccacgcaataacaccgggccttggtctaccggttacgga
atgccgaatgctcaatatcaacctcgttaccagcaatcaaatcagcaacaatacatgcac
catcaaaattcttacagaaacaatttaaatcatcatcaagggtctggtaattattcatca
aattacaatcaagacagaaataaacagtacaaccaatatggcgggggcggaggtaacaga
cgtaatcgataa
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integrated database retrieval system
