Microplitis demolitor: 103578990
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Entry
103578990 CDS
T05600
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
mdl
Microplitis demolitor
Pathway
mdl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103578990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdl03400
]
103578990
DNA repair and recombination proteins [BR:
mdl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103578990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Adenylsucc_synt
Motif
Other DBs
NCBI-GeneID:
103578990
NCBI-ProteinID:
XP_008558477
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MSKRSLRSNTLSDELTSPKKPKKDEKKTSKVASRSKPVTSKRTTTKAKDKPEPKPIPKPQ
SKTKSKKADAIGKENKEESTISKRKRQVKEKPKVKEDNLENKKKDKETPVKRKRRKIIIP
SDDSGDDSDEYKPSDDEASGSDASVLSVAAGSRPDSTSDTATDDNPTPKKARKPRNPGKG
RKCNPNQKKTQKNDNESGKLFQLEKAKLPSGTKSWPHLKYSFLQPDQIRDAKKKRPDDPE
YDAKTLYVPQEFLDQQTPAMRQWWVLKSQHWDCVLLFKIANFYSLYHMDAVIGVNTLGLS
YIPRDFSFSGFIELHYSRYFKTLVEKGYKVARIEQTENPEMRDERCEKFQSQITKFDKVI
KREVCQIITRGTRVPSVLDIENFSPYSTYLLSLVEQQNSAHLSSYGICFIDTSIGVFHIG
QFEDDCNNSRLLTLFSHYTPAHIIYGKGNLSAKTIKIINTHLPVITIKEALLQNCQFWTA
TKVLEKLYEGEYFKDESNEFSWPDGLKPFLNDQGTNGFSPAKDKILAVHALGGCVYLLTE
SVLDHQLLAQKKFETYIPPDMNVVNGQQVGPLVNMVIDAATIENLNILGSSPSLLTSLDH
CCTDFGKRLLKEWVCRPPCDKNTIIARQYAVTELRDLKRICLEASKQLNNLPDLERLLSK
IHAYGNVPNIKNHPDARAFMSSMLIYNKRKITDLITCVKGFKRVLEIIKIFDPLVSDLIV
QTTQIEPKGGFPDLTKTLDHFEFRFDSDLALKQGCIIPKKGMDPEYDKVIAELEEIEKDA
NEYLKSQSKHFGTEIKYTGSTENAYQIEIPDSVVDKVTDHYEYQGKRKGFKRYLTEETKK
FHERQTKAEEQHEKVLKDSDRRTFAKFSEHYDMWATAVYKVAVLDVLISLAEYSRRGDKC
VPKINDTNEVMIDIKDGKHPFITSDNFVPNDTSLASNGYGPLVILTGPNMGGKSTIMRQV
GLLSIMAHIGCHIPAQSCKFSLIDRVFTRLGANDDMRTGRSTFLVELSEAATFVQHATKH
SLVLVDELGRGTSTHDGAAIAAAVLQALTKLECRSIFSTHYHSLVDDFKNNSSVSPAHMA
CLVESEESDATQETVTFLYKLAEGACPKSYGFNAARIAGIKANITKRANDLAKKLEDAGN
RRSLFMSLCNVDNNNVKGTITQLNAITVK
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacgtagtttacgatcaaatactctttctgacgaattaacgtcacctaaaaaa
ccaaaaaaagatgaaaaaaaaaccagtaaagttgcatcgcgttcaaaaccagtaacatct
aaacgaacaacaactaaagccaaagataaacctgaaccgaaacccatacctaaacctcaa
tctaaaactaaatctaaaaaagctgatgctattgggaaagaaaacaaagaagaatccact
atttctaaaagaaagcgtcaagttaaggaaaaacctaaggtcaaagaagataatctggag
aataaaaaaaaagataaagagacccccgtaaaaagaaagagaaggaaaataattattccc
tctgatgacagtggagacgattcggatgaatacaaaccgagtgatgatgaagcttcaggc
tcagatgcctcagtattgtcagtagctgctggttctagaccagactctacgtcagatact
gcgactgatgacaacccaaccccaaaaaaagcacggaaaccaagaaatcccggtaaaggt
agaaagtgtaatccaaaccaaaagaaaactcagaagaatgataatgaatctggcaaatta
tttcaattggaaaaagcaaaattaccgtcaggtactaaaagttggcctcacttgaaatat
tcattccttcaacccgaccaaattcgtgatgctaagaaaaaacgaccagatgatccggaa
tatgatgctaaaacactctacgtaccccaagaatttcttgatcaacaaactccggcgatg
cgtcagtggtgggtgcttaaaagtcaacattgggactgtgttttgttgtttaaaattgct
aatttttattcattatatcacatggatgctgttattggagtcaacacacttggtttgtca
tatataccccgtgatttttcattcagtggatttattgagttacattatagtcgttatttt
aaaacacttgttgaaaaaggatacaaagtagctcgtatagagcaaactgaaaatccagaa
atgagggatgaacgttgtgaaaaatttcaatcacaaataacgaaatttgataaagttata
aaacgtgaagtttgtcaaattattactcgaggtactcgagtaccttcggtattagacata
gaaaatttctcaccttattctacttatttattatcgttggttgaacaacaaaattcagct
catttatcatcttacggaatttgttttattgatacaagtattggagtttttcatataggt
cagtttgaagacgattgtaacaattcacgtctacttacgttgttttctcattatactcct
gcccacatcatctacggcaaagggaatctctctgcaaaaacaataaaaataatcaatact
catctaccagtgattaccatcaaagaagctctgcttcaaaactgtcaattttggacggcg
acaaaagttcttgagaaactttatgaaggggaatattttaaagacgagtcaaatgaattt
tcttggcccgatgggttgaagcctttcctgaacgatcaaggtactaacggttttagtcca
gctaaagataaaatattagcagttcatgcactcggtgggtgtgtttatttattaactgaa
tctgtgttggatcatcaactactagcgcagaagaaattcgagacatatatacctccagat
atgaatgtagttaatggacaacaagttggaccgcttgtcaatatggtaattgatgctgct
actatagaaaatttgaatattcttggcagtagtccgtcacttttaacttccttagatcac
tgctgcacagattttggtaagcggttattgaaagaatgggtttgtcgaccaccttgtgac
aaaaatactattatagctcgccaatatgctgtcaccgagttacgtgatctgaagcgcata
tgtctggaggctagtaaacagttaaacaaccttccagatcttgaaaggttgttaagtaaa
attcatgcttatggaaatgttcctaatataaaaaatcatcctgatgctcgagcattcatg
agctcaatgttgatttataataagcggaaaataaccgatttgataacttgtgtaaaaggt
tttaagcgagtacttgaaataataaaaatttttgatccattagtgagtgacttaattgta
caaacaacacaaattgagccgaaaggagggtttcccgatttaacgaaaactcttgatcat
tttgagtttaggtttgattcagatttagcattaaaacaaggttgtataatacctaaaaaa
ggcatggatcctgaatatgataaggtaattgctgaattagaagaaatagaaaaagacgct
aacgaatatttgaaatctcaaagtaaacattttggaacggagattaagtatactggtagt
accgaaaacgcttatcaaatagaaataccagacagcgtagtggataaggttactgatcat
tatgaatatcaaggtaaacgtaaaggttttaaacgttatttaacggaagaaacaaaaaaa
tttcatgaacgacaaacaaaagctgaagaacaacatgaaaaagtgcttaaagactctgat
aggcgtacctttgcaaaattcagtgagcactatgacatgtgggctacagctgtttacaaa
gttgctgttctcgatgtccttatttcacttgctgaatactccagaagaggtgataagtgt
gttccaaaaatcaacgatactaacgaagtaatgatcgacattaaagatggaaaacatcct
tttatcacctcagataatttcgtccccaatgacacatcacttgcgagcaatggctatggt
cctttggttattctaactggaccgaatatgggtggaaaatcaacaattatgcgtcaagta
ggtttattgagtattatggcacatataggatgtcatatacctgcacagagttgtaagttt
tcattgatagatcgtgtattcactcgactgggtgccaatgatgatatgagaaccggtagg
agtacattcctcgttgaattaagtgaagctgctacgtttgttcaacacgctactaaacat
tctcttgttcttgttgatgaacttggtcgaggtacatcgacacatgacggtgcagctatt
gcagcagctgttcttcaagctcttaccaaacttgagtgtagatcaatattttctactcac
tatcattcgcttgtagacgattttaaaaataattctagtgtttcaccagcacacatggct
tgtttggttgagagtgaagaaagtgatgctactcaagaaaccgttactttcttatacaaa
ttagccgaaggagcatgtccaaaatcatatggatttaatgctgcacgcattgctggcata
aaagccaatattacaaaacgagccaatgatcttgcgaaaaaactcgaagatgccggtaat
cgaagaagtttattcatgtccttatgcaatgttgacaataataacgtcaaaggaacaatt
acgcagctgaatgccattacggtcaaataa
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