Microplitis demolitor: 103579004
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Entry
103579004 CDS
T05600
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
mdl
Microplitis demolitor
Pathway
mdl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103579004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdl03021
]
103579004
03019 Messenger RNA biogenesis [BR:
mdl03019
]
103579004
Transcription machinery [BR:
mdl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103579004
Messenger RNA biogenesis [BR:
mdl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103579004
U7-dependent histone pre-mRNA processing factors
103579004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
103579004
NCBI-ProteinID:
XP_008558501
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MGTKRKTVDTQVPAEESDLLSIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDA
LPFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIK
VSNIATEQMLYTESDLESSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGV
KTLYTGDFSRQEDRHLMAAEIPNVHPDVLITESTYGTHIHEKREDRENRFTNLVHEIVNR
GGRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDK
IRRQIAINNPFVFKHISNLKGIDHFDDIGPCVVMASPGMMQSGLSRELFESWCTDSKNGV
IIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRTLKPP
HVILVHGEQNEMSRLKAALQREYEDDPNTTMEIHNPRNTVAVELNFRGEKTAKVMGTLAM
NTPKPKEILSGILVKRNFNYHLLAPSDLSKYTDMSMSQVVERQGIHFNASLPVLKHLLTQ
IAGNIDIIDDKKMRVFKCVDLIVEGKIIIMEWVASPVNDMYADAVLTALLQAEMMDTAPP
KTLSAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFRGEKLYVTVNNKKAHIDLVSLDVSC
IEDETFQQIVQTAVSKLYQSLAPPCDSI
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaaaacgtaaaacagtagacactcaagttccagctgaagaaagtgatttatta
tcaataaaaccattgggtgctggtcaagaagtaggaagatcttgtataatgcttgaattt
aaaggtaaaaaaataatgcttgactgtggtattcatccaggattatcaggaatggatgct
ctaccattcgtagatttagttgaagcagatgaaatagatttattattaatatcacatttt
catttggaccactgtggtgctttaccatggtttctacaaaaaacaagttttaaaggccgt
tgttttatgacacacgcgacaaaagctatttatcgttggttactatcagattacattaaa
gtaagcaacatagctactgaacagatgttatatactgaatcagatttagaatcaagtatg
gacaaaatagaaacaattaattttcatgaagaaaaagatgtttttggaattaaattttgg
gcttacaatgcaggacatgtattaggtgcggcaatgtttatgattgaaatagctggtgtt
aaaactctttatactggagattttagtagacaagaagatcgtcatttaatggctgctgaa
attccaaatgttcatccagatgttttgataactgaatcaacttacggtacacatattcac
gaaaaaagagaagatcgtgaaaatagatttactaatttagttcacgaaatagttaatcga
ggtggtagatgtctgattcctgtttttgctcttggtcgagctcaagaattgctattaatt
ttagatgagtattggagccaacatccagagcttcatgaaatacctatttattatgcatca
tcacttgctaaaaaatgtatggcagtttatcaaacttatgttaatgctatgaatgacaaa
attcgtagacagatagctattaataatccatttgtatttaaacatatatcaaatctaaaa
ggaattgatcatttcgatgacattggtccttgtgtagtaatggcatcgccgggtatgatg
caaagtggattatcacgggaattatttgagtcctggtgtacagattcaaaaaatggtgtt
attattgctggatattgtgttgagggaacattagctaaaacaatattatcagaacctgaa
gaaattacaacaatgagtggccagaagctaccacttaaaatgtctgttgattatatttca
ttttctgctcacactgattatcaacaaacatctgaatttattagaactttaaaaccacct
catgtaatattagtgcacggtgaacaaaatgaaatgagtcgtcttaaagctgcattacaa
cgtgagtatgaagatgatcctaatactacaatggagatacacaatccacgtaatacagtt
gctgttgaacttaatttccgtggtgaaaagacagctaaagttatgggaacacttgctatg
aatacaccaaagccaaaagaaattttatctggtattttagttaagagaaattttaattat
catctattggcaccatcagacctttcaaagtacacggatatgagtatgagtcaggttgtt
gaacgtcaaggtattcatttcaatgcttcattgccagttcttaagcatcttcttactcag
atcgctggaaatattgatattattgatgataaaaaaatgcgtgtttttaaatgtgttgat
cttattgtggagggtaaaataataataatggaatgggttgctagtcctgttaatgatatg
tatgctgatgctgttcttacagcacttcttcaagctgaaatgatggatacagcacctcct
aaaacactatctgcaccaacaaaaatggatcgtatgcatttcaaagagtgtcttattgaa
atgctccaagagatgtttggtgaagactctgtaccaaagatattccgaggtgaaaaatta
tatgtcactgttaacaacaaaaaagctcatattgatcttgtcagtcttgatgtttcttgt
attgaggatgaaacttttcaacaaatagtacagactgctgtatcaaaactttatcaatct
cttgcaccaccttgtgattcaatataa
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