Microplitis demolitor: 103580439
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Entry
103580439 CDS
T05600
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
mdl
Microplitis demolitor
Pathway
mdl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103580439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdl03021
]
103580439
03019 Messenger RNA biogenesis [BR:
mdl03019
]
103580439
Transcription machinery [BR:
mdl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103580439
Messenger RNA biogenesis [BR:
mdl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103580439
U7-dependent histone pre-mRNA processing factors
103580439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_GCN1
V-ATPase_H_C
DUF5658
Motif
Other DBs
NCBI-GeneID:
103580439
NCBI-ProteinID:
XP_008560409
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MNPKQQISEWLNEVVVSQNDKIKIENLSKVQEYLLHNDPQQTSSSFGDLLSFCSDSNKDV
RRLVAGFIEQAGDKYPDKIPEMLTPLILLLSDRVPAVVKRSTRTSIRILTSALKWIANSS
VTPEMETAWNKLSTVKTQVMKMIDSDNEGIRTQAIKFLEAVVLLQTHPNPEIQKNPGDFS
LEDVPLTLKILRHRKLEEEANQVMDFLIEFHSSPHVTSVNLITCMGTIVRIAKMRPQFIG
RVIEELKRLQGSLPPTLSSWQILSVKKQLEKSLQELRNHSARVRIKQEPVDDLNHVAKRQ
LETPASSSIKRTKFETSPANIELSDNFILQRLTVDVATELVIDGMSRVPDEMTGDKFLQK
YPDFSVPHDLSSQRGEIAHLLAAQLKQTARKKNDDSRKISKSPKDVSGKMNDSQKKLKLP
KNDDDFVMKDLNQEPTDTSIKVKQENDGQEGFNIPQLSKATQQKMLMITIDRIISSENSL
PGGVLSNRSKILLRLATLNPEIKKLVLLYISEDLGTRLDLAVGLLYEEYALDQGFKRRIL
INSSKQEAPLQAYNNLLSTLVALINSHKDCDLLLARLYLDVPLITEEMVDSLKIICDVRA
NSSLYLLKDLISLRPTKKLQFLNILLFHSGHQQSAISEPAISIIVELCAREDLSKFISEY
AVIYLGFLGLESPPEVLFGRDRGRDQVETQWSESTVRACLGLYQVLLQINKGLINQLARI
YTSMKPNVRRFVIKLMESSIRSFGIDSPELFTLVENYPRGSETLVTRILHILTEKEVPSP
ELVSCVRKIYETRSLDVRFLIPVLNGLTKKEVIAILPKLIKLNPLVVKEVINRLSFAANR
NADPSQKSPLTPTELMIALHNLKSTEVDLKTLVAGTALCFAEKEIFTQEILAIVINRLVD
QTPLPILLMRTVMQALIHHPQLSEFVLNILQRLVLKKIWTNPKLFEGFAKCCCRLQPQSF
AVIRQLPQCEIDHLFEIVPELKNNYVCYFKPKIEVFDDDENDNDDYTNSNDNKNNKNNGN
TGKDDKDTGLYNRDYGYGYNNRYGNLGYNGYNGYNGRGYGYGGYGYNPNGYGYGYGTNGY
GTTGYGVNGYGRSGYY
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctaagcagcaaatttctgagtggttaaacgaggtagttgtgagtcaaaatgac
aagataaagatagaaaatctctctaaagttcaagaatatttactgcataacgatccccag
caaacaagcagtagttttggtgatctcttgtcattttgttcagactcaaataaagatgtg
aggaggctagttgctggtttcattgaacaagctggtgataagtatccagataaaattcct
gaaatgctgacacctctgatccttttgctcagtgacagagtgccagcagttgtaaaacgt
tcaacccgtactagcattcgcattctaacatctgcgttaaaatggattgccaactcatca
gtgacaccggaaatggaaaccgcttggaataaactgagtaccgtaaaaactcaggtcatg
aaaatgatcgacagtgacaacgagggaatacgtacacaggctattaaatttcttgaagcc
gtcgtgctgctgcagacacaccccaacccagagatacaaaaaaatcctggtgatttttca
ctagaagacgtaccgctgactcttaaaatactgcggcatcgcaagcttgaggaagaagcc
aatcaggtcatggattttctgattgaatttcatagttcgccgcacgtaaccagcgttaac
ttgataacttgcatggggactatcgtccggatagcgaaaatgcgcccgcagtttattggc
agagtcatcgaggaactaaagcgcctgcagggcagcctgccgccaacgttgtcttcatgg
cagatcctcagcgtgaagaaacagttggaaaagtcactgcaggagttgaggaatcattca
gctcgagttagaatcaagcaggagcctgtagacgacctaaatcatgtagccaagcgccaa
ctggagacaccagcaagcagctcaattaagcgtacgaaattcgagacttctccagcgaat
attgagttgtctgataattttatactccaacgtctaactgttgatgttgctaccgagtta
gtgatcgacggaatgagccgagttccggatgaaatgactggagataaatttttacaaaaa
tatcctgacttctctgttcctcatgatctatcgtctcaacgtggtgaaattgctcacttg
ctagctgcccaattgaaacaaactgcccgtaaaaaaaatgatgattctagaaaaattagt
aaatcaccaaaagacgtatcaggaaaaatgaatgattcacaaaaaaaattgaaactacca
aaaaatgatgatgattttgtaatgaaagacttaaatcaagagccaacggacacttctatt
aaagtaaaacaggaaaatgatggtcaagaaggctttaatattccacagctttcgaaagct
acccagcaaaaaatgctaatgataacaattgacaggatcatcagttcagaaaattcgctt
ccaggtggagttttatcaaatcgttctaaaatattactaagattagcgacactaaaccct
gaaataaaaaaacttgtcctgctgtatatttctgaggacttggggacaagactagatctg
gctgttggtttgctgtatgaagagtacgctctggaccagggattcaaaagacggatttta
ataaatagcagcaagcaagaagcgccactgcaagcttacaataatctgctgtcaactttg
gtggctctgataaattcccacaaagattgtgatctattattagcacgtctgtacttggac
gttcctctgataactgaggaaatggtggactcgttgaagatcatctgcgacgtacgcgct
aatagttctctttacttattaaaagacttgatctccctaaggcctactaagaagttacaa
ttcctgaatattctactcttccattcgggacaccagcaatcggctatcagcgagcctgcc
atcagcatcatagtcgagctctgtgcccgcgaagatctcagtaaatttatttccgagtac
gcagtgatatatttaggattcctgggacttgaatctccgccggaagttctctttgggcga
gaccgcgggcgggatcaagtagaaacccaatggtctgaatcaacagtacgggcttgtcta
ggtctctatcaagttctgctgcaaataaacaagggtctaattaatcagctagcgcgtatt
tacacgtccatgaagcccaatgttagaagatttgttataaaattgatggaaagttcaata
cgttcattcggaatcgattctcctgagttatttaccctcgtggaaaactatcccagaggt
tcagaaactctggtaacacgcattcttcatatattaactgaaaaagaagtaccaagtcct
gaactagtttcctgtgtccgcaaaatatatgaaacccgttccttggacgtgcgttttttg
attcctgtgttgaatggactgaccaaaaaagaagtcattgccatcttacccaaacttatc
aagctgaacccattggtcgtgaaagaagtcatcaatcggctgtcattcgcagccaatagg
aacgcagatccatcacagaaatcgccattgactcctactgaactgatgattgctctgcat
aacttgaaatctaccgaagttgatctcaagactctggtcgctggcaccgcgttatgtttc
gctgaaaaagaaatttttacccaagaaatactagcgattgtcataaatcggctggtcgat
caaactcccttgccgattttactcatgcgcactgtaatgcaagctttgattcaccacccg
cagctcagtgagttcgttttgaatattttgcagcggctagttttgaaaaaaatatggacc
aacccaaagctttttgaaggattcgctaaatgctgctgccgtctgcagcctcagagcttc
gcggttattcgacaattacctcagtgtgaaattgatcatttatttgagatcgtacctgaa
ttaaaaaataattatgtttgttattttaagcctaagattgaagtcttcgatgatgatgaa
aatgacaatgatgattatactaatagtaatgataataaaaataacaaaaataatggtaat
actggcaaagatgataaagacactggtctgtacaatagagactatggatatggatacaat
aatcgttatggtaatctaggctacaatgggtacaatggatataatggacgtggttatggt
tacggcggatatggatacaatcccaatggatacggatatggatatggtactaatggatat
gggactactggatacggagtcaatggttacggtcgatctggatactactga
DBGET
integrated database retrieval system
