Methylomonas denitrificans: JT25_000140
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Entry
JT25_000140 CDS
T04191
Name
(GenBank) helicase SNF2
Organism
mdn
Methylomonas denitrificans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
DEAD_2
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
AMK74907
UniProt:
A0A140E3D3
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Position
complement(30776..34996)
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AA seq
1406 aa
AA seq
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MQSSRLVERLKTYRTLTPEQQIILKLLAVYYGYSSLINLAKCLGSLGIREGDKTLKSEAV
KARLKPLIKAGLLEENVKSGGTRCCRTLAEVLTRQAVVDKEFDLFAGAVQMNNPPGHGYY
RYSTVDDCIREARIQFYRGDYARVDECLESGAHYLGKLPPVNELYLSWFLNPLDVAWFTT
HHPQLLLGLAGFSGLHQLLYLYADQKLDGFLEQLLFVSQGTQQELLNRVALELRLLRGEW
DEVAQRVADQSDPELQAIAATLIFLRGDYSAAVNRFEAALLQLRKASGQRTAYFYGLAGV
FYPLAILKNNDTKQRAKLGTLINQAIKADNYWLGIYHQLALFQRFLQGDLSLRDQLLNTD
LTYKISSGYRESGYPETLLTPPLLLHVFLALIKFWVKADQFNHVTPLSQKLYRHLLDNGY
RWPAAELAKIFTSIEPPRSMQWDRSFFDGRPALAELFTSRPDWDLALDALLNLPKAEKKA
EAVVQTDKPTRLAWLLSYDDISHHLDIEPREQKQQAKGGWSKGRAIALKRLAHETHSFDY
LTEQDLKLCAHIKEYRDSGWYGSGTYFEFDNSTPQALLGHPLLFWADAPEVRVDVVKGEA
ELRVKKLEGSDKIKISLEPVPGHEQKFYVAKETPTRLRVLEFTGDHHKIFAVLGAKGLEV
PVSAQDRVLQTLTSISGLLTVHSDIGGSSSSAEQVQADATPRVHLLPWGEGLRVAMLIRP
FAAAGAYYQPGHGGESVLAEIEGRHCQTKRDLALEKQRAQTVLQACDVLEQAERDGAGDY
LLDQPEQCLELLLQLQALPAEQAVLEWPEGVRFRLLGQTNGSGFSMQIKRDNDWFALQGE
LQVNEDTVIEIQQLLGLLNNREGRFLKLQDGQFIALTEEFRRRLDDLRAYADLHGKKVRI
NPLAALTLEDWQDDAGFKADKHWQAHMQRLKDSRDYQPTVPSTFQAELRDYQLDGYRWLA
RLARWGVGACLADDMGLGKTVQGLALLVDRAPNGPSLIVAPTSVCMNWENEAGRFAPTLN
PQILGSGDRQRLLDNLGPYDLLICSYGLLQQEQVAEMLAKIQFQTVILDEAQWIKNIATR
RSQGAMNLQAEFKLIMTGTPLENHLGELWNLFRFINPGLLGSLEQFNQRFAGPIERDRSA
EARFQLKKLIQPFILRRTKTQVLQELPPRTEIPIYVELSSEEMAFYEALRRDSLAALSSA
DAPAGQKQLQILAAISKLRRSCCNTLLANSAVSLPSSKLAAFGDIVDELLDNKHKALVFS
QFVDHLQLIKNYIEQRGIRYQYLDGSTPAKDRQLRVDAFQRGEGELFLISLKAGGVGLNL
TAADYVIHMDPWWNPAVEDQASDRAHRMGQQRPVTIYRMIAKNTIEEKIVALHSHKRDLA
DSLLDGADISGKVSADELLNLMKGEN
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcttctcgtttagtcgaacgccttaaaacttatcggacattaaccccggagcaa
caaattatcctgaagttgctggccgtttattacggctatagttcgctgatcaatctggct
aaatgtctgggcagtttgggtatcagggaaggcgacaaaaccttgaagtcggaagcggtc
aaagcccgtttaaaaccgctgattaaagcgggcttgttggaagaaaacgttaagtcgggt
ggcacccgttgctgccgaaccctggcggaagtgctgacgcggcaagccgtcgtggataag
gaattcgacttgtttgccggcgcggtacaaatgaacaatccgcccggccacggttactat
cgttatagcaccgtggacgattgcatccgcgaagcgcgcatccagttttatcgcggtgat
tacgccagggtggacgaatgtctggaatccggcgcgcattatttaggcaaattgccgccg
gttaacgaactgtatctatcctggtttttaaaccccttggatgtagcctggtttaccacg
caccatccgcaattgttgctgggcctggccggcttctcgggtttacatcagctgctgtat
ctgtatgccgatcaaaaactggacgggtttttggagcagttattgttcgtcagtcagggc
acgcagcaagaattgttgaaccgcgtggccttggaattgcgcttgttacgcggcgaatgg
gatgaggtcgcgcaacgggtggcggatcaaagcgatccggaattgcaagccattgccgcc
acgttgatttttttacgcggcgattattcggcagctgtcaatcgcttcgaagcggccctg
ctgcaactgcgcaaagcctccgggcaacgcacagcctatttttacggactggcgggggtg
ttttatccgctggctatcctgaaaaacaacgacactaaacaacgcgccaaactcggcaca
ttaatcaatcaggccattaaagccgacaattattggctgggtatctatcatcaattagcc
ttgtttcagcgttttctacaaggcgatttgtcattgagggatcagctgttaaataccgat
ttgacttataaaatcagtagcggctatcgggaaagcggctacccggagaccttgctcacc
ccgccgttactgctgcatgtgtttttggccctgatcaaattctgggtcaaggccgatcaa
ttcaatcatgtcacgccgctcagccagaagctgtatcggcatttgttggacaacggctat
cgctggccggcggcggaattggcgaaaattttcaccagcatagaaccgccgcgttccatg
caatgggatcgcagttttttcgacggccggccggcgttggcggaattgtttaccagccgt
cccgattgggatctggcgttggacgcattgctaaacctgccgaaagcggaaaagaaagcc
gaggcggtcgtacaaaccgataagccaacgcgcttggcctggctgctgagttacgacgac
atcagccatcatttggacatagaaccgcgcgaacaaaaacagcaagccaagggcggctgg
agcaagggccgggcgattgcgttgaaaaggctggcgcacgaaacccacagcttcgactat
ttaaccgagcaagatctcaagctgtgcgcgcacatcaaggagtaccgcgatagcggctgg
tacggcagcggcacgtatttcgaattcgacaacagtacgccgcaggcgttactgggacat
cccctgctgttttgggccgatgcgcccgaggtgagggtggatgtagtcaagggcgaagcc
gagctgcgagtgaaaaagctggaaggcagcgacaagatcaaaatcagcctggaacccgta
cccgggcacgaacaaaaattctatgtcgccaaggaaaccccgacgcgcttgcgagtgctg
gagtttaccggcgaccatcataaaatctttgcggtactgggtgcgaagggcctggaagtg
ccggtgtcggcgcaagaccgggtcttgcaaaccctgaccagcatttccggcttgttgacg
gtgcattcggatattggcggcagttccagcagcgccgagcaagttcaggccgacgccacg
ccgcgcgtgcatttattgccctggggagaaggcctgcgcgtggcgatgttgatccggccg
ttcgcggccgccggcgcgtattatcaacccggtcacggcggcgaaagcgtgttggccgaa
atcgaaggccgccattgtcagaccaaacgcgatctggccttggaaaaacagcgcgcgcag
acggttttgcaagcgtgcgacgtgttggaacaagccgagcgcgatggcgccggcgattat
ttgctggatcagccggaacaatgcctggagctgctgctgcaattgcaggcattgccggcc
gaacaagcggtattggaatggccggaaggcgtcaggtttcggctgttggggcaaaccaac
ggcagcggctttagcatgcagatcaagcgcgacaacgattggtttgcgttgcaaggcgaa
ttgcaggtcaacgaagataccgtcatcgaaattcagcaattgttgggtttattgaacaat
cgcgaaggccgcttcttgaaattgcaggacgggcagttcattgctctaaccgaagagttt
cgccgccgcctcgacgatttacgcgcctacgccgatctgcacggcaagaaagtccgcatc
aatcccttggcggcgctcactttggaggactggcaggacgacgccggtttcaaggccgat
aaacactggcaagcgcacatgcagcgcctgaaagattcgcgcgattatcaacccacagtg
ccgtccacctttcaagccgaattgcgcgactatcaactcgacggctaccgttggttggcg
cgtctggcacgttggggcgtcggtgcctgtctggcggacgatatgggcttgggcaagacc
gtgcaaggcttggctctgctggttgaccgggcgccgaatggtcctagcctgattgtcgcg
ccgacctcggtatgcatgaactgggaaaacgaagccggccgctttgcgccaacgctaaat
ccgcaaattctgggcagtggcgatcgccaacgcttgctggacaatctggggccgtatgat
ttgctgatttgcagttacggcttgttacagcaggaacaagttgccgagatgctggcgaaa
atccagttccagaccgtgattctcgacgaggcgcagtggataaaaaatatcgccacccgc
cgctcgcaaggggcgatgaatctgcaagccgagtttaaactgatcatgaccggcacgccg
ctagaaaaccatctgggcgagctgtggaatttgtttcggttcatcaatcccggtttgctg
ggatcgttggaacaattcaatcaacgtttcgcaggccctatcgaacgcgaccgcagcgcc
gaggcccgtttccagctcaagaaattgatccagccttttatcctgcgccgcaccaaaacc
caggtgttgcaggaattgccgccgcgcaccgaaatcccgatctatgtcgagctgagcagc
gaggaaatggccttctacgaagcgctgcgtcgggacagcctggcggccttgagcagcgcc
gatgcgccggctgggcaaaaacaattgcaaattctggcggccattagcaaattgcgccgc
agttgctgcaacaccttgctggctaattccgcggtgtccttacccagcagcaagctggcg
gcgtttggcgacatcgtcgacgaattactggataacaagcacaaagccctggtgttcagc
cagtttgtcgatcacctgcaattgattaaaaactatatcgagcagcgcgggattcgttat
caatatctggacggcagtacgccggccaaggaccgccagctgcgggtggacgcattccag
cgtggcgagggcgaattgttcttgatcagtttgaaggccggtggcgtgggtttaaatctg
actgccgccgactatgtgatccatatggacccctggtggaatccggctgttgaggatcag
gcctcggaccgggcgcatcggatgggtcagcagcggccggtgactatctaccggatgatc
gctaaaaataccatagaggaaaaaatcgtcgcgctgcatagtcacaagcgcgatttggcc
gatagtttgttggatggcgccgatattagcggtaaagtgtctgccgacgagttgctgaat
ttgatgaaaggtgaaaactaa
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