KEGG   Methylomonas denitrificans: JT25_002415
Entry
JT25_002415       CDS       T04191                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
mdn  Methylomonas denitrificans
Pathway
mdn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mdn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JT25_002415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdn03019]
    JT25_002415
Enzymes [BR:mdn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     JT25_002415
Messenger RNA biogenesis [BR:mdn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     JT25_002415
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 P-loop_SecA AAA_22 UvrD-helicase
Other DBs
NCBI-ProteinID: AMK75352
UniProt: A0A140E4M8
LinkDB
Position
544409..545548
AA seq 379 aa
MPFSNLGLSEALIKAIADSGYTTPTPIQSKAIPAVLTGRDLLAAAQTGTGKTAGFTLPIL
HRLAQTDHGRNRPVRALILTPTRELAAQVAESVAKYGAHQQPRLKSEVVFGGVKINPQMM
RLRGGVDILTATPGRLLDLVSQNAVKLDKVEMLVLDEADRMLDMGFIKDIRKILAMLPKK
RQNLLFSATFSADIRKLTGDLLVNPVKIEVAVENAAADTIDQRVYTVSKTAKTALLTHLV
KTKDWQQVLVFTSTKHGANKLTEKLNIANIKAAAIHGNKSQGARTSALAGFKAGDIRVLV
ATDVAARGIDIAQLPHVVNFELPRSSADYVHRIGRTGRAGQNGQAVSLVSQDEYQALRLV
EKLIGLQIPREQVDGFAAA
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgccattttccaatctcggtttatccgaggctttaataaaagctattgccgattccggc
tacacgacccctacccctattcaaagtaaagccatacccgccgtgttaaccggccgcgat
ttactggccgccgcgcaaaccggcaccggcaaaaccgccggctttaccttgccgatcttg
catcgcttggcgcaaaccgaccatggccgcaatcgcccggtgcgcgcactgatcctgacc
cctacccgcgaactggccgcgcaagttgcggaatccgtcgctaaatacggcgcgcatcag
caaccgcgcctaaagtcagaagtcgtgttcggcggcgtaaagatcaatccgcaaatgatg
cgtttgcgcggcggcgtggacattctgaccgcaacgccggggcgtctgctggatttggtc
agccaaaacgccgtgaagctggataaggtggaaatgttggtgctggacgaagccgaccgc
atgctagacatgggctttatcaaagacattcgcaaaatcctggcgatgctgccgaaaaag
cgccaaaacctgttgttttccgcgacgttttccgccgacatccgcaagttgaccggcgat
ttgctagtcaacccggtcaaaatcgaagtggccgtcgaaaacgccgccgccgacacgata
gaccaacgggtgtatacggtcagtaaaaccgcgaaaaccgccttgttgacccatctggtg
aaaactaaagactggcagcaagtattggtgtttaccagtaccaagcacggcgcgaacaaa
ctcaccgaaaaactgaacatcgccaatattaaggctgccgcgattcacggtaataaaagc
cagggcgccagaaccagtgccttggccggtttcaaagccggcgacattcgcgtgttggtc
gcaaccgacgtcgcagcgcgcggcatcgatattgcccaattgccgcatgtggttaatttc
gaattaccgcgctcgtccgccgattatgtacaccgcatcggtagaaccggtcgggccgga
caaaacggccaagcggtttcgctggtatcgcaagacgaatatcaggccttgcgcctagtt
gaaaaactgataggcctgcaaataccccgcgaacaggtagacggcttcgcggccgcttaa

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