Methylomonas denitrificans: JT25_003140
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Entry
JT25_003140 CDS
T04191
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
mdn
Methylomonas denitrificans
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdn03032
]
JT25_003140
03036 Chromosome and associated proteins [BR:
mdn03036
]
JT25_003140
03400 DNA repair and recombination proteins [BR:
mdn03400
]
JT25_003140
DNA replication proteins [BR:
mdn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JT25_003140
Chromosome and associated proteins [BR:
mdn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JT25_003140
DNA repair and recombination proteins [BR:
mdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JT25_003140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Lmo2446-like_N
Pentapeptide
Motif
Other DBs
NCBI-ProteinID:
AMK75493
UniProt:
A0A140E519
LinkDB
All DBs
Position
complement(690823..691095)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSDLIDAIASHANLTKADAGRALDGITQSIQTALKAGDSVALVGFGTFEVKERAERAG
RNPQTGEAITISAAKLPSFKAGKGLKGAVQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatccgaccttatcgacgccatcgccagccacgccaacctgaccaaagccgac
gccggacgtgcattggatggcattacccaatccatccaaactgcactgaaagcgggtgat
tccgtggcgttggtgggcttcggtacatttgaagtgaaagaacgtgcagagcgcgccggc
cgcaatccgcaaaccggcgaagccattaccatttccgccgcgaaattgccatcattcaaa
gccggcaaaggcctgaaaggcgcggttcagtaa
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