Methylomonas denitrificans: JT25_004770
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Entry
JT25_004770 CDS
T04191
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
mdn
Methylomonas denitrificans
Pathway
mdn00220
Arginine biosynthesis
mdn00240
Pyrimidine metabolism
mdn00250
Alanine, aspartate and glutamate metabolism
mdn01100
Metabolic pathways
mdn01110
Biosynthesis of secondary metabolites
mdn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JT25_004770 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JT25_004770 (carB)
00220 Arginine biosynthesis
JT25_004770 (carB)
Enzymes [BR:
mdn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
JT25_004770 (carB)
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Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
Epimerase
ATP-grasp_2
GP68
Motif
Other DBs
NCBI-ProteinID:
AMK75804
UniProt:
A0A126T279
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All DBs
Position
complement(1024312..1027527)
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AA seq
1071 aa
AA seq
DB search
MPKRTDIKSILLLGAGPIVIGQACEFDYSGTQACKALREEGYRVILVNSNPATIMTDPDM
ADAIYIEPIDWQTVEKIIEKERPDAVLPTMGGQTALNCALALDKHGVLEKYGVEMIGATK
EAINMAEDRALFNEAMARIGLEVSRAKIAHNMEEAFAAQEEVGYPTVVRPSFTMGGSGGG
IAYNREEFIEICERGLYLSPTSELLIEESILGWKEFEMEVVRDSKDNCIIICSIENFDPM
GVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFAINPDTGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYVVTKVP
RFAFEKFPQANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVDGLDEIADLSDANS
EDIILRELRYPGPERLWYLADAFRSGLSFADIHQASKIDPWFLAQVEDLINTEKTLATKT
LATLEPGELLRLKRKGFSDRRLAKLLETKESEVRSVRHKKGVRPVYKRIDSCAAEFASDT
AYLYSTYEQECEANPSDKEKIIILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDFDTSDRLYFEPLTLEDVLEIIELEKPLGVIVQYGGQTPLKLARALEAAGAPI
IGTSPDSIDLAEDRERFQKLLERLNLLQPPNATARSVDQAVNSARELGYPLVVRPSYVLG
GRAMEIVFNEEGLRRYMKEAVSVSNDSPVLLDRFLDDAVEMDVDAIYDGETVLIGGLMEH
IEQAGVHSGDSACSLPPYDLPGHMQDQLRAQVAKMAEALGVRGLMNTQFAIQGETIYVLE
VNPRASRTAPFVSKATGYPLAKIAARVMVGKSLKEQGITEERIPEYFSVKEAVFPFIKFP
GVDPLLGPEMKSTGEVMGVGKTFGEAFAKSQRASGVDLSHSGKVLISIRDADKPKLPELA
KMLIAKNYEIVATRGTAKVLKEAGIPCKEIFKVNEGRPNTVDMIKNGEVQLIVNTTEGVK
AVADSFTMRREALQRKVTYYTTMAGARAACYALGELDAGDVNCLQDLHKTF
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaaccgacataaaatcgattttattactgggcgccggaccgattgtaatt
ggtcaggcttgcgagtttgattattccggcacccaagcttgtaaggcgctgcgcgaagag
ggttaccgggtgatcctggtcaactccaatccggcaacgatcatgaccgacccggacatg
gccgatgcgatttacatcgagcccatcgactggcaaaccgtcgaaaaaatcatcgaaaaa
gaacgtcccgatgcggtgctgccgaccatgggcggtcagaccgcgctgaactgcgcactg
gcgctggacaagcacggcgtattggaaaaatacggcgtggaaatgataggcgcgaccaag
gaagccatcaacatggccgaggatcgcgcgctgtttaatgaagcgatggcgcgcatcggc
ctggaagtgtcccgagccaaaatcgctcataacatggaagaagcatttgcggcacaagaa
gaagtcggttaccccacggtagtccgtccgtcgttcacgatgggcggtagcggcggcggt
attgcctacaaccgcgaagaattcatcgagatttgcgagcggggcctgtatttgtcgcca
accagcgagctattgatcgaagaatcgattttgggctggaaagagtttgaaatggaagtg
gtgcgcgactcgaaagacaactgcatcattatctgctcgatcgaaaatttcgacccgatg
ggtgtacataccggcgactcgatcaccgtcgcgccggcgcaaaccttgaccgacaaggaa
tatcaaatcctgcgtaacgcctcgctggctgtgctacgcgagattggcgtcgataccggc
ggttccaacgtgcagtttgctatcaatcccgacaccggccggctgatcgttatcgaaatg
aaccccagggtgtcgcgttcgtcggcattggcgtccaaagccaccggttttccgattgcc
aaggtcgcggccaaattggcggtgggctatacgctggatgagttacgcaacgaaatcacc
ggcggtgccacaccggcttcgttcgagccgtccatcgattatgtggtcaccaaagtgccg
cgttttgccttcgaaaaattcccgcaagccaacgataggctgaccacgcaaatgaagtcg
gtcggcgaagtgatggcgattggccgtacttttcaggagtctttgcaaaaagccctgcgc
ggcctggaagtgggggtcgatggtctggatgaaattgccgatctaagtgatgccaacagc
gaggacattattctcagggagttgcgttatccaggtcctgaacgtttatggtatctggct
gatgcctttcgtagcggcttgagctttgcagacattcatcaggcctcgaaaatcgatccc
tggttcctggcgcaggtcgaggatttgattaacaccgaaaaaaccttggctaccaaaacc
ttggcaacgttggagccgggtgaattattgcgcctgaaacgtaaaggtttttccgatagg
cgcctggcgaaattactggaaaccaaggaatccgaagtgcgtagcgtgcgccacaagaaa
ggcgtgcgtcccgtttacaagcgtatcgattcttgcgcggcggagtttgcctccgatacc
gcctatctgtattcgacttacgagcaggaatgcgaggccaatccgtccgataaagaaaaa
atcattattctgggcggtggccccaatcggatcggccagggtatcgaattcgattattgc
tgcgtacatgccgccttggctctgcgcgaagacggttacgaaaccatcatggtcaactgt
aacccggaaaccgtttccactgacttcgatacgtccgaccgcttgtattttgagcccttg
accctggaagacgtgctggaaatcatagagctggaaaagcccctgggcgtgattgtgcaa
tacggcgggcaaacgccgttgaaactggctcgcgctttggaagcggctggtgcgcctatc
atcggtacttctcctgactcaatcgatttagctgaagaccgtgagcgttttcagaaattg
ctggagcgtctgaatttgttgcagccgcccaatgccaccgcgcgttcggtcgatcaagcc
gtcaattccgcccgtgaactcggttatccattagtggtgcggccatcctatgtgttgggc
ggcagagcgatggaaatcgtgttcaacgaagaaggtttgcgccgctatatgaaagaagcg
gtcagcgtctccaacgattcgcctgtgctgttggatcgctttttggatgatgcggtggag
atggatgtcgatgcgatttacgacggcgagactgtgctgatcggcggcttgatggaacac
atcgagcaagccggtgtacattccggtgactcggcttgttccttgccgccttacgacttg
ccggggcatatgcaggatcaactgcgcgcgcaagttgcgaaaatggccgaagcgctgggt
gtgcgcggtttgatgaacacccagttcgcgattcaaggcgaaaccatttacgtgctggaa
gtgaatccgcgcgcctcgcgtaccgcgccgtttgtatccaaagccaccggttatccactg
gcgaagattgccgcgcgggtgatggtcggtaaatccctgaaagagcagggtattaccgaa
gagcgtattccagaatatttttcggtgaaagaagcggtgttcccgttcatcaagttcccg
ggcgtcgatccgctgctggggccggaaatgaaatcgaccggtgaggtgatgggggttggt
aagacctttggtgaagcgttcgccaagtcgcagcgcgcgtcgggtgtggatttgagccac
agcggcaaggtgttgatcagtatccgcgatgccgacaaacccaagttgccggaattggcc
aaaatgctgattgcgaaaaactatgaaatcgtcgctacccgcggtaccgctaaggtattg
aaagaagccggtattccttgcaaggaaatcttcaaggtcaacgaaggcaggcccaatacc
gtggatatgattaaaaacggcgaagtacagttgatcgtcaataccaccgagggtgttaag
gccgtagccgattcgtttacgatgcgtcgagaagctttgcagcgcaaagttacctattac
acgacgatggcgggcgcgcgcgcggcttgctacgccttgggtgaactcgatgcgggcgat
gttaattgcctgcaggacttgcataaaacattttaa
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