Methylomonas denitrificans: JT25_004960
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Entry
JT25_004960 CDS
T04191
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
mdn
Methylomonas denitrificans
Pathway
mdn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JT25_004960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdn03000
]
JT25_004960
Transcription factors [BR:
mdn03000
]
Prokaryotic type
Helix-turn-helix
Other families
JT25_004960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
Mg_chelatase
AAA
AAA_2
GAF_3
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
AMK75842
UniProt:
A0A126T181
LinkDB
All DBs
Position
1063372..1064898
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AA seq
508 aa
AA seq
DB search
MSDRLLLVESELDTLFLVSQLLNSTHDLRTKLKGILEILHKRNGLHFGMITLRDVDDDSM
SICEIYGDGIDRSVRYQPGEGLVGAILDEGSTIVVERIADEPRFLSRLGVYNPDLPFIGS
PLAIEQGEVVGILAAQPCTSTFLGERARFMEMVANLIAQSVNMLRVMERKQNELASERDY
LKQTLVKNYRFENIIGHSEPMLKVFDIIRQVAKWHTTVLIRGESGTGKEVVASSIHFNSA
CANGPFLKLNCAALPDTLLESELFGHEKGAFSGAIGQRKGRFELADNGTLFLDEIGEISA
SFQAKLLRVLQEGEFERVGGVRTLKVNVRIIAATNRNLEQEVAEGNFREDLYYRLNVMPI
NMPPLRERIEDIPELASFLLNRISRQQGGRPLEIKESAIRILMKHDWPGNVRELENRLER
AAIMSQEGIIDRDVIASTGLENEIGISRTPQSIKHIDLHDENMDERERVIAALEQSGWVQ
AKAARLLDMTPRQIAYRIQTLNINVKQI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcgtttattactggttgaatccgagctggataccctgtttctggtcagtcaa
ttactgaatagtacccacgacttacgcaccaagctgaagggcatcctggagattttgcat
aagcgtaacggcctgcatttcggcatgatcaccctacgcgacgtcgatgacgacagcatg
agtatttgcgagatctacggcgacggcatagaccgttcggtgcgctaccaaccgggcgag
ggcctggtcggcgcgattctcgacgaaggcagcaccatcgttgtggaacgcatcgccgac
gaaccgcgctttttaagtcgcttaggcgtctacaacccggacttaccatttattggctcc
ccgctagccatcgagcaaggcgaggtagtcggcattttggccgcgcaaccttgcacctcg
acttttttgggcgaacgcgcccgtttcatggaaatggtcgccaacctgatcgcccaaagc
gtgaacatgctgcgcgtgatggagcgcaagcaaaacgaactggccagcgaacgcgactat
ttaaaacaaacgctggttaaaaattaccgtttcgaaaacatcatcggccattccgagcca
atgctgaaagtgttcgacatcatccgccaggtggccaaatggcataccacggtgttgatt
cgcggcgaatccggcaccggtaaggaagtggtcgccagctcgatacactttaattcggcc
tgcgccaacggcccgtttctgaagttgaactgcgcggcgttgcccgatacgttgctggaa
tcggaattgttcggacatgagaaaggcgctttcagcggtgcgatcggccaacgtaagggc
cgtttcgaattggcggacaacggcacgctgttcctcgacgaaatcggcgagatttccgcg
tcttttcaggccaagttattgcgcgtgctgcaagaaggcgaattcgagcgggtcggcggc
gtccgcaccctgaaagtgaatgtacgcatcattgccgccaccaaccgcaatctggagcaa
gaagtggccgaaggtaatttccgcgaggatttgtattaccgcttgaacgtgatgcccatc
aatatgccgccgcttcgtgagcgcatcgaggatattccggaactggccagttttctgttg
aaccggatttcccgccaacaaggcggccggccgctggaaatcaaggaaagcgcgattcgg
attttgatgaaacacgactggccgggcaacgtccgcgaattggaaaaccgcctggagcgc
gcggcgattatgagccaggaagggattatcgaccgcgacgtgatcgccagcaccggtctg
gaaaacgaaataggcatcagccgtaccccgcaatcgatcaaacacatcgatctgcacgac
gagaacatggacgaacgggagcgagtgatcgccgcgctggagcaaagcggctgggtgcaa
gccaaggctgccaggctgctggatatgacgcctaggcagattgcttatcggattcagact
ttgaatatcaacgttaagcagatttag
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