Methylomonas denitrificans: JT25_005000
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Entry
JT25_005000 CDS
T04191
Name
(GenBank) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mdn
Methylomonas denitrificans
Pathway
mdn00061
Fatty acid biosynthesis
mdn00071
Fatty acid degradation
mdn01100
Metabolic pathways
mdn01212
Fatty acid metabolism
mdn02024
Quorum sensing
mdn04146
Peroxisome
Module
mdn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JT25_005000
00071 Fatty acid degradation
JT25_005000
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JT25_005000
09145 Cellular community - prokaryotes
02024 Quorum sensing
JT25_005000
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mdn01004
]
JT25_005000
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdn04147
]
JT25_005000
Enzymes [BR:
mdn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JT25_005000
Lipid biosynthesis proteins [BR:
mdn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JT25_005000
Exosome [BR:
mdn04147
]
Exosomal proteins
Exosomal proteins of breast milk
JT25_005000
Exosomal proteins of breast cancer cells
JT25_005000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AMK75850
UniProt:
A0A126T183
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All DBs
Position
1072289..1074061
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AA seq
590 aa
AA seq
DB search
MSRYKTLPDLLKLKAHEHPDDVAHWILNTDGTWHPISYLEFYREVTDLSWKLKTLGVEKN
QVVAIMATTSHAWELIHHACLSLGGIVVGMDPNENPDQLNAIVKIANTKILAIDQIEYLD
KFQDLSQFETIIVFNAAPLEDQPDKLKFLDTSKTAAGELNDTPQPDILQPSDIATILFTS
GTTGMPKGIAYRHDQIIAAIDAILPTYPELSHQPCHLACWLPLSNLFQRIVNLCALAGGA
EVYFVEQPQKIIDYLPTINPHIFIAVPRFYEKLYQGFEARLNQQPQFISHCLRYCLRKGE
SQSIIGTLFRTANRQVFKSFTALFGQNIRYMVSGSAAMPLWLLHRYRAMGLLILEAYGLS
ENVVPIAANRSSEYRFGTVGKALPGNTIALEKDNELLVKGLGIFNGYLGDEDPKRSFVEN
YYIGTGDYAEIDTDGFIRLTGRKSEVFKTSTGRKIAPVAIESILQNNFAVEHAVVFGENR
KFLIALVTVVSSNITKDQSTTAFVQQVAINLTQSVSDLPEYKRPVGVIFSFKSLSVAEQE
LTTNLKLRRKNIRHHYETWINQLYSLLEDPKSRIHSQPISANQDIVLLKL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgatataagacacttcccgatttattaaaactcaaagcacacgaacatccggat
gacgtagctcactggattctaaataccgacggtacgtggcatccgataagttacttagaa
ttctatcgggaagtgacggatttatcctggaagttaaagactcttggtgttgaaaaaaat
caggtggtagcaattatggctaccacctcgcacgcttgggaattgatacatcacgcttgt
ttatcgttgggcgggattgtagtcggtatggatccaaacgagaatcccgaccagttaaac
gcaatcgtaaaaattgcaaacactaaaatactagcaatagaccagattgaatatctagac
aagtttcaggaccttagccaattcgaaactattattgtatttaatgctgccccattggag
gatcaaccagataagcttaaatttttagacacctccaagaccgcagccggcgaactcaac
gacactccccaacccgatattcttcagccttcggatatagccaccattctcttcacttcc
ggcaccacgggaatgccaaaaggcatcgcctatcggcatgatcaaatcattgccgctata
gatgcgatattgccaacctatcccgaactaagccaccagccatgccatttagcctgttgg
ttacccctttccaatctatttcagcgcattgtgaacttatgcgctttagctggcggtgcc
gaagtctacttcgtggaacaaccgcaaaaaatcattgattatctgccaacaatcaatcca
cacatatttattgcggtacctcgtttttatgaaaaactttatcaaggatttgaagctagg
ctgaatcaacaaccccagttcatttctcattgtctgcgatattgccttagaaagggagaa
agccaatcgattattggcacactcttcaggactgccaatcgtcaagtttttaaatcattt
accgccctttttggccaaaatatacgttatatggttagcggatcggcagccatgccattg
tggttgttacaccgctatcgtgctatggggttgttgattttagaagcttatgggctaagt
gaaaacgtggtgccgatagcggcaaataggtcttcagaataccgttttggcactgtcggc
aaagctttgcccggcaacaccatagccttggagaaagacaacgaattactggttaaagga
cttggcatttttaatggctatcttggggatgaagaccccaaaagaagcttcgttgaaaat
tattacattggaactggagactatgcagaaattgatactgatggtttcatacgcttaaca
ggacgaaaatctgaagtatttaaaacatcaactggtagaaaaatagctccggtggcgatt
gagtcgatactccaaaacaattttgcagtggagcacgccgttgtctttggtgaaaataga
aaattcttgattgcattagtgaccgttgttagttcaaatatcaccaaagaccaatctaca
accgctttcgtacaacaagttgctatcaatctgacgcaaagcgtttcggatttacccgaa
tataaacgccccgttggcgtcattttttcgttcaaaagcctgtcagttgcagagcaagag
ctaacgacaaacctgaaacttagacgtaaaaatatccgacaccattatgaaacatggata
aaccaactgtatagcttgctagaagacccaaaatctagaattcactcccaaccaatttca
gccaatcaagacatcgttttattgaaactttag
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