Methylomonas denitrificans: JT25_005565
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Entry
JT25_005565 CDS
T04191
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mdn
Methylomonas denitrificans
Pathway
mdn03420
Nucleotide excision repair
mdn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JT25_005565
03430 Mismatch repair
JT25_005565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdn03400
]
JT25_005565
Enzymes [BR:
mdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JT25_005565
DNA repair and recombination proteins [BR:
mdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JT25_005565
MMR (mismatch excision repair)
Other MMR factors
JT25_005565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_11
AAA_30
Viral_helicase1
UvrD_C_2
AAA_22
AAA_6
Motif
Other DBs
NCBI-ProteinID:
AMK75962
UniProt:
A0A126T1K0
LinkDB
All DBs
Position
complement(1195757..1197664)
Genome browser
AA seq
635 aa
AA seq
DB search
MQIQLTKEQKIILRHNHGVGFITAGAGTGKTTTLLEYVMQHILNEGADPEDFLILSFSNA
AGEEFNDRLLLNKNKHGGALKRLDQVDVMTYDAFGKKIIQEHYAEFGFRNVPVVVTNTKR
LRKCAAKIAQKQGAEKKALTKDVTRTYHGLTMDNDNPLVDKVLKVFAKVKQRRNLLDFKD
MMSLLQGDKVAYITRAAKHYRYLLVDELQDTDCLQAKMLVTLASAIPTVLMVGDPKQNIY
EFRGALARNWQDITSKLKPKEYTLTKTQRIPQQSLPFINAIGKEIYPGAPLSSDIKGQPI
QYISCQDFGNEQALFIANEIKRLINQGLAKVDEIACLGRTRRMLSDLSILLVDQRVDVIE
NYRKRTEVHLRGIRNLCRMVSFLKRSRDSTSLELPENRANNLASWLKRLGASPTEIETVL
TNLSKKGWKAVSVASQIDGKEPPHYRRILNFRNYIDQAVQAEEPQKIIAYLSNALRMVLR
RRHKKLDLHLLIRDLAELEIQSRQFKHWNQIDLKLLDRSEPETGVFLGTMHGAKGREWKY
VFVINCVEGIVPIHYAKTDDLVKTRHAVVSEKRLFYVACTRHKIGLYLVNSPTSLVGYKN
KKRKDLKFKEPSVFIENHKKLLKYQEAAKRKVSTE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatacaactgactaaagaacaaaaaatcatcctcaggcacaaccatggcgtgggc
tttatcactgccggtgcaggaacagggaaaaccaccactttgctagaatatgtcatgcag
catatcttgaatgaaggcgccgatcctgaggactttctgatcctgagtttcagcaatgcg
gcaggcgaagaatttaatgatcgcttactgttaaacaaaaacaaacacggcggcgcatta
aaacggttagaccaagtagacgtcatgacctacgatgcctttggtaaaaagatcattcag
gaacactatgcggaatttggctttcgtaatgtgccggtcgtcgttaccaatactaagcgt
ttgcgaaaatgcgctgccaaaatagcccaaaaacagggcgccgaaaaaaaggcattaaca
aaggatgtcaccagaacataccatgggttgaccatggacaatgacaaccctctggtcgat
aaggtgctgaaggtcttcgccaaagttaagcaacgccgtaatttgctggactttaaagac
atgatgtctttgttacaaggggataaggtggcatacatcacccgtgctgccaaacattac
cgctatttactggtcgatgaacttcaagataccgactgcctgcaagcaaaaatgctggtg
accttagccagcgccatacccaccgtgttgatggtgggcgatcccaaacaaaacatctac
gaattccgcggtgccttagctcggaactggcaggacataacctcgaagttaaaacccaaa
gaatacacgttgaccaaaacgcaacgcattccgcaacagtcattaccgtttatcaatgct
attggcaaggagatttatccaggggcgccgttatccagtgacatcaaaggccagcctatc
caatacatttcttgccaggattttggaaacgagcaagctttgttcatcgccaacgaaatt
aaacgtttgatcaaccaaggtctcgcgaaggtggatgaaatagcttgcttaggccgaacg
agacgcatgcttagcgacttgtcgatattgctggtggatcagcgggtggatgtcattgaa
aactatagaaagcgtaccgaggtccatcttagaggtatcagaaatctatgccggatggtg
agctttcttaaacgaagccgagacagtacctccctggaattgcctgaaaatcgggctaac
aacttagcttcctggctaaagcggttaggtgcgtcacccactgagattgaaacggtttta
acaaatctgtccaaaaagggttggaaagccgttagcgttgcgagccaaattgacgggaaa
gaaccgccacattaccggcggatattgaactttagaaactatatcgaccaggcggtacag
gccgaagagccacaaaaaataatcgcctacctcagcaacgccctaagaatggttttacgg
agacgacataaaaaactagatctccatctcctaattcgtgacttggccgaattggaaatt
caatcccgtcaattcaaacactggaatcagatcgatctcaaactactcgatagaagcgag
ccggaaaccggtgttttcttaggcaccatgcatggcgcgaaaggtagagagtggaaatat
gtttttgtgattaattgtgtagaaggaatcgtgcctatccattacgccaaaactgacgat
ctagtgaagactcgacatgcagtagtgtctgagaaaagattattttatgtcgcctgtacc
cgccataaaataggcttatatctggttaactcaccgactagcttagtgggctataaaaat
aaaaaaagaaaggatttaaaatttaaagaaccatcagtctttatagaaaaccataaaaag
ctcctgaagtatcaggaagccgcaaagcggaaagtgagtactgaataa
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