Methylomonas denitrificans: JT25_006760
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Entry
JT25_006760 CDS
T04191
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mdn
Methylomonas denitrificans
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdn03009
]
JT25_006760 (rimO)
Enzymes [BR:
mdn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JT25_006760 (rimO)
Ribosome biogenesis [BR:
mdn03009
]
Prokaryotic type
ribosomal protein modification factors
JT25_006760 (rimO)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AMK76194
UniProt:
A0A126T393
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All DBs
Position
complement(1453797..1455107)
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AA seq
436 aa
AA seq
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MSNPRVGFISLGCPKALVDSEQILTRLRSEGYQVSPNYKDSDLVIVNTCGFIDAAVEESL
DSIGEALAENGKVIVTGCLGARQDEILARHPQVLKITGAHATDEVVSAVHEYLPPAHNPF
TDLVPPQGIKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIDDVMLEAERLADAG
VKELLIVSQDTSAYGLDLKYASRRWRGRELQTRFYDLAEALGELGIWARMHYVYPYPHVD
EVVPLMAEGKILPYLDIPFQHANSRILKLMKRPAAAENNLERIRAWRKICPDLTIRSTFI
VGFPGETEQEFEELLQFLSEAQMDRVGCFAYSPVKGAVANDLPDAVPEEVKQERLARFME
HQSAISAERLQRRVGRVETVLVDEVVEEGAVARSQSDAPEIDGQVFIDGASHLQVGDFVD
VEIEEADEYDLWGKLI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatccccgcgttggatttattagtttgggttgtcccaaagccctggtcgatagc
gaacagattttgacccgcttgcgtagcgaaggctaccaagtctcgccaaactataaagat
tcggatttggtgatcgtcaacacctgcggctttatcgatgcggcggtagaggagtcgctg
gacagcatcggtgaagcgttggcggaaaacggcaaggttatcgtcaccggttgcctgggc
gcgcgccaggacgagattttggcgcgccatccgcaggttctaaaaatcaccggcgctcat
gccaccgatgaagtggtgtcggcggtgcacgaatatctgccgccagcgcacaacccgttt
accgacttggtgccgccgcaaggcatcaagctgacgcccaagcactatgcctatctgaaa
atatcggaaggctgcaatcatcgatgcacgttttgtatcattccgtcgatgcgcggcgat
ttggtcagccggcctatcgacgatgtgatgctggaagccgaacgtttggccgatgccggc
gttaaggagttgctgatcgtttctcaagataccagcgcttacggtctggatttgaaatac
gcgagtcggcgttggcgcgggcgtgaattacagacccgcttctatgatttggccgaagca
ttgggggagttggggatttgggcgcggatgcattacgtctacccttatccgcatgtcgat
gaagtggtgccgttgatggcggaaggaaaaatcctgccgtatctggatattccgtttcag
cacgccaatagtcggatattgaagttaatgaagcggcctgcggccgcggaaaacaatctg
gaacgtatccgcgcctggcggaagatttgtccggatttgacgatccgcagtacctttatc
gtcggttttcctggcgagaccgagcaagagtttgaagagttgttgcaattcttaagcgaa
gcgcaaatggatagggtaggttgttttgcctattcgccggtgaagggtgcggtagccaac
gatttgccggatgccgtaccggaagaagtcaagcaagagcgcttggcgagatttatggag
catcagtcggcaatcagtgccgagcgcttgcagcgccgggtcggcagagtcgagacagta
ttggtcgatgaagtggtcgaggagggggcggtcgcgcgcagccaaagcgatgcacctgaa
attgacggccaggtgtttatcgacggcgcaagccatttacaagtcggcgatttcgtcgat
gtcgaaatcgaggaagccgacgagtatgacttgtggggtaaactgatctaa
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