Methylomonas denitrificans: JT25_009380
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Entry
JT25_009380 CDS
T04191
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mdn
Methylomonas denitrificans
Pathway
mdn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JT25_009380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdn03019
]
JT25_009380
Enzymes [BR:
mdn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
JT25_009380
Messenger RNA biogenesis [BR:
mdn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JT25_009380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
AMK76699
UniProt:
A0A126T3P0
LinkDB
All DBs
Position
complement(2030244..2031671)
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AA seq
475 aa
AA seq
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MAHVILKLRDKVIFSFFKKIFSPVEQVADQVNESAGASAVKIYPRSEHCISRAQISENAL
KVLQRLKKADYEAYLVGGCVRDLLLGREPKDFDVATNASPEQIKQVFRNCRIIGRRFRLA
HVFFGREIIEVATFRGSEPEESDQQVVHEDGRLLRDNVFGTLEQDVWRRDFTVNALYYNI
RDFSVVDYTGGMQDHAAAVMRLIGDPEVRYREDPVRMLRAIRFAVKLGFTLHPDTERPIY
AQADLLKSIPSARLYDEVIKLFLSGYGLQTFEMLRHYGLFAILFPDTDRCLAIEDHDFPR
LFLIRALENSDARFNDGKTLTPYFLLAALLWEPLQLAAQKRIAHGENETLAYQNAANEVL
TRQIKITALPRHITQSMREVWFLQNKFSRTVGPRPYRLLEQPKFRAAYDFLRLRAETGGA
DPELVEWWTGFQEADDAERERMTAPPKSGGGKSRNRKTGRYRSRAKPAPIGNDAT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
ctggcacacgtcattctaaaattaagggataaagtcatttttagtttcttcaaaaaaatc
ttttcaccggttgagcaagttgccgatcaggtcaatgaatcggcaggggcgagtgccgtg
aagatttatccgcgttcagagcactgtatttctcgtgcgcaaatcagtgaaaatgccctg
aaagtattgcagcgcctgaaaaaagccgattacgaggcctacctggtcggcggctgcgtc
cgggatttgctgctggggcgggagcccaaggatttcgacgtagcgactaacgccagtccg
gagcagatcaagcaagtctttcgcaattgccgaattatcggcaggcgctttcggctggcg
catgtgttttttggccgcgagattattgaggtggcgacgtttcgcggctccgagccggaa
gagtccgaccagcaagtggtgcatgaagatggccgattattgcgcgataacgtgttcggc
acgctagagcaagacgtctggcgccgcgatttcaccgtcaacgcgctgtattacaacatc
cgcgatttttccgtggtcgattataccggcggcatgcaggaccatgccgcggcagtgatg
cggctgatcggcgatccggaagtgcgctaccgggaagatccggtacggatgctgcgcgca
atccgttttgccgtgaagctgggctttacgctgcatcccgacaccgaaaggccgatttac
gcgcaagccgatttgttgaagagcatcccctcggcacgcctttacgacgaagtcattaaa
ttgtttttgtccggctacggcctgcaaacgttcgagatgctcaggcattacggcttgttt
gcgattttgtttccggataccgaccgctgtctggcgatcgaagaccacgattttccgcgc
ctgtttttgatcagggccttggaaaactccgatgcccgcttcaacgacggcaaaaccctg
acgccttattttttattggcagccttgttgtgggaaccgttgcaattggccgcgcaaaaa
cgcatcgctcacggcgaaaacgaaacgctggcctatcagaacgccgccaacgaagtactg
accaggcaaatcaagatcaccgcgctgcctcgccacatcacccaatccatgcgcgaagtc
tggttcttgcagaataagttttccagaacggttggcccccggccttatcgtttgctggag
cagcctaaattcagagcggcttacgactttttacggctgcgcgcggaaaccggcggtgcc
gatccggagctggtcgagtggtggactggttttcaagaagccgacgatgcggagcgtgaa
agaatgaccgctccgccaaaatccggcggcggtaaatcccgtaaccggaaaaccggccgg
taccgttctcgagccaaaccggcccccataggcaatgacgctacctaa
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