KEGG   Methylomonas denitrificans: JT25_009615
Entry
JT25_009615       CDS       T04191                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
mdn  Methylomonas denitrificans
Pathway
mdn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    JT25_009615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdn03400]
    JT25_009615
Enzymes [BR:mdn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JT25_009615
DNA repair and recombination proteins [BR:mdn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     JT25_009615
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C Zn_ribbon_PriA AAA_30 PriA-like_WH Mtr2 HypA Zn_ribbon_6 AAA_19 A2L_zn_ribbon SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AMK76745
UniProt: A0A126T3S5
LinkDB
Position
2086115..2088322
AA seq 735 aa
MPNCDAPGNLILKVAVPVPLDRLFDYLPPLGVSLPELLPGVRVLVPFGKRQQVGVLMAVA
DNSDFDRDKLKPAIAILDRHPLLSETDIRLLNWAARYYHHPLGEVLAAAFPVALRQGRPA
LRQRQPCFGLSPQGRLVSPEQLHRAPKQQALLALLQTTDTAMTAAALSAYKPALKALLDK
GLVTAQDPVPGAALAVTNTALPANPEQQAAIAAVTANLGRFAVSLLEGVTGSGKTEVYMQ
IIAKVFEQGKQVLVLLPEISLTPQLEQRFLKRFAVNMVSTHSKLTDNQRLQAWLSMQQGH
AAIMLGTRSALFTPMPRPGLIILDEEHDSSFKQQEGFRFSARDVAIARAKGLGIPVLLGS
ATPSLESMANVAQHRYQLLHLPNRAGNAVAPSFQLLDIRNKRMQAGLSEPLQVEIHATLA
KKQQALIFLNRRGYAPVQICHGCGWVSRCRRCDANLVIHAADRLLRCHHCGSEQPLPKQC
PACKTGELQALGLGTERIEQTLETLFPDKVIVRLDRDTTQRKGALEQYLEQINDGRVDII
LGTQMLAKGHHFPGVTLVAILDIDSGLFSIDYHGSERLAQLIVQVAGRAGRADQPGKVIL
QTRHPQHPLLDILLSKGYRAFAQSALQERRQAGLPPFGHQALLRVQAGKAEEPQQFLQAV
CQKISELNPGKVQILGPVTAPMARRAGLFRFQLLLQSPRRKELHQLLDSLLPAIYALKEA
KKVRWSLDVDPVDLY
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgcctaactgtgacgctcccggcaatttaattttgaaagttgccgtgccggttccgctg
gaccgcttattcgattatctgccgccgctcggcgttagtttgcccgaattgctgcctggc
gtcagagtgttggtacccttcggtaagcgtcaacaagtgggcgtattgatggctgtcgcg
gacaattccgacttcgatagagataaactgaaaccggctatcgccattctggataggcat
ccgctattgtccgaaaccgatatacgcctgttgaattgggccgcccgctactatcaccac
ccgctcggtgaagtgctggcagcagcgtttccggtggccttgcgccaaggccggccggct
ttgcggcaacggcagccctgtttcggcctcagcccgcaaggccggctggtctccccggaa
cagttacaccgcgcacccaagcaacaagcgctattggctttgttgcaaactaccgatact
gcgatgaccgctgccgcgcttagcgcctataaacccgcgctgaaagccttgctcgataaa
ggtttggtcacggcgcaagacccagttccaggtgcggcattagccgtgaccaacaccgcg
ttgccggccaatccggagcagcaggcggctatagctgccgtgaccgctaatctgggccgc
tttgccgtatccttattggaaggcgtgaccggtagcggcaagaccgaagtgtatatgcag
atcatcgccaaggtgttcgagcagggcaaacaagtcctggttttactgccggaaatcagc
ctgacgccgcaactggagcagcgttttctaaaacgttttgcggtgaacatggtgtccacg
cactccaaattaaccgacaaccagcgtttgcaggcctggctgagcatgcagcaaggccac
gcggcgatcatgctcggcacccgttccgcgctgttcacgccgatgccgcgccccggtctg
atcattctcgacgaggagcacgacagttcgttcaaacaacaggaaggatttcgcttttcc
gcgcgggacgtcgccatcgccagggccaagggtttaggcatcccggtactattgggctcg
gcgacgccgtcgctggagagcatggcgaacgttgcccaacaccgctatcaattactgcat
ttgcccaatcgggccggcaatgccgttgccccgagttttcagctactggatattcgtaat
aaaagaatgcaagccggcctgtccgagccgctgcaggtggaaatccacgccacgctggcc
aaaaaacaacaagcgctgatttttctcaaccggcgcggctatgcgccggtgcagatatgt
catggttgcggctgggtctcgcgctgccggcgttgcgatgccaatctggtgattcatgca
gccgaccgtttgctgcgctgccatcactgcggcagcgaacagcccttgcccaagcagtgc
ccggcttgtaaaaccggcgaattacaggcgctggggttgggtaccgaacgcatcgaacaa
accttggaaaccttgtttccggacaaggtaatcgtgcgtctggaccgggataccacgcag
cgcaagggcgcgctggaacaatacctggagcagattaacgatggccgggtcgatataatt
ctggggacgcaaatgctggccaagggccaccattttccgggagtcacgctggtagccatt
ctggatatagacagcggcctgttcagtatcgattaccacggcagcgaaagactcgcacaa
ttaatcgtgcaggtcgccggccgggccggccgggccgatcagcccggcaaagtgatattg
caaacccggcatccgcaacatcccttgctcgacatcttgttaagcaaaggctatcgggct
ttcgcgcaaagcgcgctgcaagagcggcggcaggccggcttgccgccgttcggtcatcaa
gccctgctcagggtgcaagccggcaaggccgaggaaccgcaacagtttttacaggcggtt
tgccagaagatcagcgaattgaatcccggcaaagttcagatattggggccggtgacggcg
ccgatggctaggcgcgcgggtttgtttcgtttccaattgttattgcagagtccgcggcgc
aaagaactgcatcaactgctggatagtttgttgccggccatttatgcgttgaaggaagcc
aaaaaagtgcgctggtcgctggatgtcgaccccgtggatctgtattag

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