Methylomonas denitrificans: JT25_010245
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Entry
JT25_010245 CDS
T04191
Name
(GenBank) diguanylate cyclase
Organism
mdn
Methylomonas denitrificans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
NMT1
GGDEF
SBP_bac_3
PAS_3
PAS_9
PAS
PAS_4
PAS_8
NMT1_2
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-ProteinID:
AMK76864
UniProt:
A0A126T555
LinkDB
All DBs
Position
complement(2224501..2229135)
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AA seq
1544 aa
AA seq
DB search
MKKTIFGLSAVFFLLFCTSSVAVTPAANRPLETVALQLKWFHQFQFAGYYAAIEQGYYAE
EGLRVEIRERNPDQDYIEQVASGQAEYGIGDSGIIAQYANGKPIAALAAIFQHDALVLFS
KQASGIVSPYEMAGKRIMYDVVGENNAQVRALLAEANLNESRYQKVAETFNDADFIADKV
DVMSGYITDRPFSFRAAGIKVNIINPQNYGIDFYGDLLFTSRKELLQHPGRAERFLRASL
KGWEYALAHPDPLIELIQKNYPSKLSPEQLRYEAEEIRKLIMPDSIPLGQIEAARLRRVA
GIYANLKLARPLNDSQLNDFVYGGGKSSDLQLSDAERQWLAEHSEIRVGIDRNFPPYEWL
DAAGEHQGMIAEHLKLIEQRLGVKFVLIMDKSWQGVLDMAKRGELDMIAGASKTPDREQY
LNFTQPYISTPTVIIGDKNSGYINSLQLLTGGRVAIEQGYFVQELLSRDYPGMQLLTAPS
VQEALNLLAEGKVDAYIGDAASASYAIKQQGFLNLHIAGQPGYVNETRMAALKSHPQLLS
LLEKALASISQTEHDAIINRWMGLKVEQGIRMDALLRSAAVALLALLFFVYWVFRLRKEI
KARKRSEADLARLYTNMSLGFALHQVIRDDKGKIVDYRYLDINPAFEKMTGIARGNWIGK
TVKQVLPNTEGAWIASFDGLDTSGEPQHFENCVADLGRWYAIDSYKAGPDRFVVLVQDIT
ARKQTELALKESEERFRISQIYGGVGIWEADLLKNRQFWSEIVTTELGFPHNTLHTWNDF
LEVVCPEDRPLIIEATRQHLECGANYDVEYRIQTPAGEKRWMRSVGQVERDSGGKPVRMR
GIVHDVSKRKAAEEKLRLSARVFSDAHEGIIITDINAKIIDVNAAFTDITGYSREEALGR
NPSFLKSGRQSPEFYEAMWEIINQTGHWQGEVWNRKKNGDLYAELLTVSALRDDAGNIIN
YLGLFSDITESKQQQQALEVLAHFDPLTQLPNRALFADRFAQAIAHSKRAESLLAVCYLD
LDGFKQVNDNFGHETGDQLLVEVAKRIKLKLREGDTVCRLGGDEFALLFENLQSVQQCED
ALARIHQAMAEPFELENRYVRIAASSGVTIYPLDLEDPDILLRHADQAMYQAKLDGRNRY
RIYDHLAGQTTSINHRPSRLEQALAEVGQALMDNQFCMYYQPRVNIKAGKVVGVEALIRW
HHPERGILPPAEFLPIVENTTLEIDVSNWVLRQAFKQLQIWHDLGLNLQVSVNISPRHLQ
WPDFIKTLETLLAEYPQIPSKQLELEVLESSVLEDLISVGETLKQCYHDLGVPCALDDFG
TGYSSLAHLRHLTINTVKIDQSFVRNMIDDPDDMAIVESVIALAKAFKREAVAEGVEDIE
HGIFLIDLGCSVAQGCAIAEAMPANAVLGWVNSYRNHPAWAACGKVSLSNWQSQLELLKL
QQQYWLRRLEHCLQPMADSNPRWPILNSKKSHLGRWLERLRHERRIDVRLLEQLERAQSR
QQSLAERLQRHRLDGRKGGDEDFGKLREANLQIMQLLERLESEA
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccattttcgggctgtcagcggtattttttttactgttttgtacgtccagc
gtcgctgtcacgcccgcagcaaatcggccgctggaaacagtagcgctacaattaaaatgg
tttcatcagttccaattcgcgggttattacgccgctatcgagcaaggctactatgccgaa
gaaggcctgcgggtagagatacgcgaacgcaatcccgatcaggattacatcgagcaagtg
gcatccgggcaagccgaatacggtatcggtgattccggcatcatcgcccagtacgccaac
ggcaagcccatcgcggccctagccgccatttttcagcacgatgcgttggtgctgttcagc
aaacaagcttccggcatcgtcagtccttacgaaatggccggcaagcgcatcatgtacgat
gtggtcggcgagaataatgctcaggttcgcgccttgctggccgaggccaatctgaacgaa
agccgttatcaaaaagttgccgaaacctttaacgacgcagactttatcgcggataaagtc
gatgtgatgtccggctatatcaccgaccggccttttagctttcgcgccgcgggcatcaaa
gtcaacatcatcaatccgcaaaattacggcatcgatttttacggcgacttgcttttcact
agtcgcaaggaactgttgcaacatccaggccgggccgaacgcttcctccgggccagcctg
aaaggctgggaatatgcactggctcaccccgatccgcttatcgagctgatccaaaaaaac
tatccaagcaaacttagtccggagcaattgcgttacgaagcggaagaaatccgtaaactg
atcatgccggacagtatcccgctcggccagatagaagctgcccgtttacgccgcgtggcc
ggtatttatgccaacctgaaattggcccggcctttaaacgacagccagctcaatgatttt
gtctacggcggcggtaaatccagcgatttgcaattgagcgacgcggaacggcaatggctg
gccgagcattctgaaattcgggtgggcatagaccggaattttccgccctacgaatggctg
gacgcggctggcgaacatcaaggcatgattgccgaacatttaaagctaatcgagcagcgc
ttgggggtgaagtttgttctgatcatggacaagtcctggcagggagtgctggacatggcc
aagcgcggcgaactggatatgatagccggggcgtccaaaacccccgatcgagaacagtat
ctgaatttcacccagccctatatcagcacgccgacggtgatcatcggcgataaaaacagt
ggttatattaattccctgcaactgctgacgggggggcgtgtcgccatcgaacaaggttat
tttgtgcaggaattgctaagcagagactacccgggaatgcagctgctgaccgcaccctcg
gtacaagaagcgctgaatctgctggccgaaggcaaagtggacgcgtatatcggcgatgcg
gcttcggccagttatgcgattaagcaacaaggcttcttaaatctgcatattgccggccag
cccgggtatgtcaacgaaacccggatggctgcgctcaaatcccatccgcaattgctgtcg
ctgttggaaaaagccctggccagtatcagtcaaaccgaacacgatgccattattaaccgc
tggatgggcctgaaggtcgagcaaggcatacggatggacgccctattgcgctcagccgcc
gtggctctgctggccttgttgtttttcgtctattgggtgttcaggctgcgtaaggaaatc
aaagcccgcaagcgcagcgaggctgacctggccaggctttataccaatatgtcgctgggt
tttgcattgcaccaggtgatacgcgatgacaagggcaaaatcgtcgattaccgctatctg
gatatcaatccggcttttgaaaaaatgaccggtattgcccgtggcaactggataggcaaa
accgtaaaacaggtgttgccgaataccgaaggagcctggatcgccagcttcgacgggctg
gataccagcggcgagcctcagcatttcgaaaactgcgtggccgatctgggccgttggtat
gccatcgatagctataaagccggtcccgatcgtttcgtggtgttggtgcaggacattacc
gcgcgcaaacagaccgaactggcgctaaaagaaagcgaggaacgctttcgtatcagccaa
atctacggtggcgtcggtatttgggaagcggatttattgaaaaaccgccaattctggtcg
gaaatcgtcacgaccgaattgggtttcccgcataacacactgcatacctggaacgatttc
ctggaagtggtttgcccggaggacaggcctctaatcatagaggcgacccggcagcatctc
gaatgcggtgccaattacgacgtggaataccgtatccagacgcctgccggcgaaaagcgc
tggatgcgctcggtcggccaggtcgagcgggacagcggaggcaagccggtgcgcatgcgc
ggcattgtccatgacgttagcaaacgcaaggcggccgaggaaaaactgcggttatcggcg
cgggtattttcggatgctcacgaaggcatcatcattaccgacatcaacgcaaagatcatc
gatgtcaacgccgccttcaccgacatcaccggctacagccgcgaggaagcgctgggtcgc
aatccgagttttttgaaatccggccggcaatcgcccgaattttacgaagcgatgtgggag
ataataaatcagaccgggcattggcaaggcgaagtctggaatcgaaagaaaaacggcgat
ttgtatgccgaattattaacggtttcggccttgcgcgacgacgccggcaatatcatcaat
tatctgggcttgttctcggacatcaccgaaagcaagcaacagcagcaagcgctggaagtg
ttggcgcatttcgatccgctcacccaattgcccaatcgcgccttatttgccgaccgcttt
gcccaggctatcgctcacagcaaacgggccgaatcgctgctggctgtgtgttatctggat
ttggacggcttcaagcaggtcaacgataacttcggccacgaaaccggcgatcaattgtta
gtggaagttgccaaacgcatcaagttaaagctgcgcgaaggcgatacggtttgccggctg
ggcggcgacgaatttgcgttgttgttcgaaaatctgcagtcggtgcagcaatgcgaagac
gcattggcgcgtattcatcaggccatggccgaaccgttcgagttggaaaaccggtatgtg
cggattgccgccagcagcggcgtcaccatctatcccttggatctggaagatccggatatt
ctgttgcgccacgccgatcaggccatgtatcaggccaaattggacggtcgcaatcgctat
cggatctacgatcatttggccggacaaacgaccagcatcaatcatcgccccagccgtttg
gagcaagcgctggcagaggttggtcaggcgctgatggataaccagttttgcatgtactac
caacccagggtcaatatcaaagccggcaaagtagtgggcgtggaagccctgatccgttgg
catcatccggaacgcggcatattgccgccggccgaatttctgccgatagttgaaaatacc
accttggaaatcgacgtcagcaactgggtactgagacaagcatttaagcaattacaaatc
tggcacgatctcggtctgaatttgcaagtcagcgtgaacatatcgccacgccatctgcaa
tggccggatttcatcaaaaccctggagaccttgctggcggaatatccgcaaatcccttcc
aagcaattggagctggaagtattggaaagtagcgtactggaggatttgatctcggttggt
gaaacgctgaaacaatgctatcacgacctgggagtgccctgcgcgctcgacgatttcggc
accggttattcgtcgctggcgcatttgcggcatttgaccatcaataccgtgaagatcgat
cagagcttcgtacgcaacatgatagacgacccggatgacatggccattgtcgaaagtgtg
attgcgttagccaaggcgttcaagcgcgaggcggttgcggaaggcgtggaagatatagaa
cacggcatttttctgatcgacttgggttgcagcgtcgcccaaggttgcgccatcgccgaa
gccatgccggccaatgcggtattgggctgggtgaatagctatcgcaaccatccggcctgg
gcggcttgcggcaaggtttcgcttagtaattggcagagccaattggaattgctgaaactt
cagcagcagtattggttgcgtcgtctggagcattgcctgcaacccatggccgacagcaat
ccgcgttggcctatcctgaactcgaaaaaatcgcatctgggcaggtggctggaacggctc
agacacgaacgccgcatcgatgtgcgtttactggaacaactggagcgggcgcaatcccgg
cagcaatcgctggcggaaagactccagcgtcatcgcttggacggcaggaagggcggcgac
gaggatttcggcaagttgcgcgaagctaatctgcaaataatgcagttgctggaacgactc
gaatcagaggcctga
DBGET
integrated database retrieval system
