Methylomonas denitrificans: JT25_012260
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Entry
JT25_012260 CDS
T04191
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mdn
Methylomonas denitrificans
Pathway
mdn00470
D-Amino acid metabolism
mdn00550
Peptidoglycan biosynthesis
mdn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JT25_012260 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JT25_012260 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mdn01011
]
JT25_012260 (murD)
Enzymes [BR:
mdn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
JT25_012260 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mdn01011
]
Precursor biosynthesis
Amino acid ligase
JT25_012260 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
TrkA_N
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AMK77245
UniProt:
A0A126T587
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All DBs
Position
complement(2671654..2673024)
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AA seq
456 aa
AA seq
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MNTANLLGNLQSHFKLNPDSARLLIVGLGATGYSAAQFLQKTPIKFAVIDSRKNPPLIDN
LREQMPDVPVFSGGFDQSALDVATHLLVSPGVSLHEAAIQKAVQAGVTVLSDIDLFSCAT
DKPIIAITGSNGKSTVTTMLGEMANAAGVKTAIGGNLGTPALDLLQQDAELYVLELSSFQ
LERTTALNASVATVLNVSPDHLDRHDGMADYAAEKQRVFRGDGVMILNADDAMVMAMREP
GRQTLTFSTQTQADFYLRRGETDTLMHGEQALMAAGKLRLEGTHNIDNALAALALGTAAG
LSITKMCDALRKFKGLPHRMQKVAEKGGINWVNDSKATNIGACIAALKGYEHKVILIAGG
EAKGADMSELVPVVTEKTKAVVLIGKDAPLIAQALNNCVPVHFAGNMKEAVTIAANLASA
GDSVLLSPACASLDQYRSYVDRGNKFAEAVMSLPLC
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgcaaaccttctcggcaatctgcaaagccatttcaagttgaatccggatagc
gcgcgcctgttaatcgtgggcctgggcgctaccggctattcggctgcgcaatttttgcaa
aagacgccgattaaattcgcggtgatcgacagccggaaaaacccgccgctaatcgataat
ttgcgcgaacaaatgccggacgtgccggtgttttctggcggtttcgaccaatccgcactg
gatgtcgccactcacttactagttagtcctggcgtgtccttgcacgaagccgccatccaa
aaagccgtgcaagcaggcgtcaccgtgctgagcgacatcgatctgttctcctgcgccacc
gacaaaccgattatcgccatcaccggctccaacggtaaaagcaccgtcaccaccatgctg
ggcgaaatggctaacgccgccggcgtaaaaaccgccatcggcggcaatctaggcacaccc
gcgctggatttgctgcaacaggatgccgaactctacgttctggaactgtccagcttccaa
ttggaacgcaccaccgccttgaacgccagtgttgccacggtgttaaacgtcagtccggat
catctggaccgccatgacggcatggccgactatgcggccgaaaaacaacgcgtatttcgc
ggcgacggcgtaatgatcttgaacgccgacgacgccatggtgatggccatgcgcgaaccc
ggccggcaaacattgactttttccacgcaaactcaagccgatttttatctgcgtcgtggc
gaaaccgataccttgatgcacggcgaacaagccttgatggcggccggtaaattgcgcctg
gaaggcacccataatatcgacaatgcgcttgctgccctggccctgggcactgcagccggc
ctgagcatcaccaaaatgtgcgatgcgctcagaaaattcaaaggcctgccgcaccgcatg
caaaaagtcgcggaaaaaggcggcattaattgggttaacgattccaaagccaccaacatc
ggcgcctgtatcgccgcactaaaaggctacgagcataaagtgattttaattgccggaggc
gaggccaaaggcgcggacatgagcgaactggtaccggtcgtcaccgaaaagaccaaggcc
gtggtactgataggcaaagacgcgccactgatcgcgcaggctttaaacaactgcgtacct
gtccatttcgccggcaatatgaaagaagcggtaaccatagccgccaacctggccagcgcg
ggcgacagcgtactgttatccccggcctgcgccagcctggaccaatatcgcagctatgtt
gaccgcggcaataaattcgccgaagccgtgatgagtctgcccttatgttga
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