Methylomonas denitrificans: JT25_012760
Help
Entry
JT25_012760 CDS
T04191
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
mdn
Methylomonas denitrificans
Pathway
mdn02020
Two-component system
mdn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JT25_012760 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JT25_012760 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdn03021
]
JT25_012760 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mdn02035
]
JT25_012760 (fliA)
Transcription machinery [BR:
mdn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JT25_012760 (fliA)
Bacterial motility proteins [BR:
mdn02035
]
Flagellar system
Flagellar assembly proteins
Stator
JT25_012760 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_38
UPF0122
DUF5797
TY-Chap3
HTH_28
DUF1548
Motif
Other DBs
NCBI-ProteinID:
AMK77338
UniProt:
A0A126T5J1
LinkDB
All DBs
Position
2782505..2783251
Genome browser
AA seq
248 aa
AA seq
DB search
MSGAAMYAAVQAGNVDALVIQHAPLVKRIAYHLMGRLPDTVQLDDLIQSGMLGLLEALKH
YDAGQGASFDTYAGIRIRGAMLDELRRSDWTPRSVHKKARMVAEAIREVENHLGRDAKDT
EVAGHMGIDLTEYHHILQDAVSCKTFSVEELVQGEDSVIDDVHGNQQPEDVLIQHNFQKA
LAKAIAELPERERLVISLYYDEELNLREIGKVLDVSESRVSQICSQAMLRLRARLADWVE
GKDNEKCS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagcggcaatgtatgctgccgtgcaggctggaaatgttgatgccctagtcatt
caacatgcgccgctggtaaaacgcattgcctaccacttgatgggccggttgcccgatacc
gtgcaactcgatgatttgattcaatccggcatgctgggcttgctggaagcgctgaaacat
tatgatgccggccagggagccagcttcgatacttatgccggcatccgcattcgcggggct
atgctggacgaattgcgccgttccgattggacgccgcgttctgtgcataagaaggcccgg
atggtggcggaggcgatacgcgaggttgagaaccatctgggacgcgacgccaaggatacc
gaagtggccggacatatgggtatcgatctgactgaatatcatcatattctgcaggacgcg
gtgtcttgtaagacctttagcgtcgaagaattggtgcagggcgaagacagcgttatagat
gatgtacacggcaatcagcagccggaagatgtgctgatccaacacaattttcaaaaagcc
ttggccaaggccattgcggaattaccggaacgggagcgcttggttatatcgctgtattac
gacgaagagctgaatttacgtgagattggcaaggtgctcgatgtaagcgaatcgcgggtt
agccaaatttgcagtcaggcgatgttgcgcttacgcgctagacttgcggattgggtggaa
gggaaagataatgaaaagtgcagctaa
DBGET
integrated database retrieval system
