Methylomonas denitrificans: JT25_014840
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Entry
JT25_014840 CDS
T04191
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mdn
Methylomonas denitrificans
Pathway
mdn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JT25_014840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdn03021
]
JT25_014840
03400 DNA repair and recombination proteins [BR:
mdn03400
]
JT25_014840
Enzymes [BR:
mdn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JT25_014840
Transcription machinery [BR:
mdn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JT25_014840
DNA repair and recombination proteins [BR:
mdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JT25_014840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Cu_amine_oxidN1
Motif
Other DBs
NCBI-ProteinID:
AMK77735
UniProt:
A0A126T6M2
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All DBs
Position
3204647..3205657
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AA seq
336 aa
AA seq
DB search
MQSSIVGLLKPRLVEVINESANHSRIVIEPLERGFGHSLGNALRRVMLSSIPGCAVTEIS
IEGVLHEFTTIEGVQEDVIDIILNLKKLAVIVHSKDEVTLTLSKSGVGVVTARDIDLPHN
VELVNPDLIIANINNQDCSLNVKIKVERGRGYVPASLRKEMYDDAPVGVLMVDAAFSPIV
KVAYHVESTRVEQRTNLDRLVIELETNGTVDPEQAIKLAASILHDQLSVFVDFEKVNEQI
QEEVTIEEESFDPVLLRPVDDLELTVRSANCLKAENIFYIGDLIQRTEVELLRTPNLGKK
SLTEIKDILAIKGLSLGMRLENWPPENLADQSQAGI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttctattgttggcctactgaagcctagacttgtcgaggtgataaacgaatcg
gccaaccactcgagaatcgttatcgaacctctggaacgcggctttggccattctttgggt
aatgctttgaggagagttatgctttcctcaattccaggttgcgcagttacggaaatctct
atagaaggcgtgttgcatgaattcactactatagaaggtgttcaggaggatgtcatagac
attattctgaatctaaaaaagctggcagtgattgtccattctaaggacgaagtaactctc
accttgtcaaaaagcggagtgggtgtagtcactgctcgtgacatcgatctacctcataac
gttgagttggtcaacccagatttgatcattgctaacatcaataatcaagattgctcgctg
aacgtcaagatcaaagtggaaagagggcggggatacgttccagccagccttaggaaagaa
atgtatgacgacgcacctgtcggcgtactgatggttgatgcagcgtttagtccgatagtt
aaagttgcttatcacgtggaaagcactcgtgtagaacagcgtactaacctggacagactt
gttattgagttggagacaaacggtacggttgatcctgaacaagcgattaaattagctgca
tctattttgcatgatcagctgtctgttttcgttgatttcgaaaaggtaaacgaacagata
caggaagaagtaaccatcgaagaggaatcattcgaccctgtgttgttgcgtcctgtagat
gatttggagttaacggtccgttctgctaactgcctaaaagcagaaaatattttctatatt
ggtgatttgattcaacgcactgaagtagagctgttgagaacaccgaatctaggtaagaaa
tcattaacagagattaaagatattcttgcaattaaaggtctgtcattaggtatgcggttg
gaaaactggccacctgaaaatctggctgaccaatcgcaagctggaatttga
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