Methylomonas denitrificans: JT25_016955
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Entry
JT25_016955 CDS
T04191
Name
(GenBank) Fis family transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
mdn
Methylomonas denitrificans
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdn03000
]
JT25_016955
Transcription factors [BR:
mdn03000
]
Prokaryotic type
Helix-turn-helix
Other families
JT25_016955
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
PAS
PAS_8
AAA_5
PAS_9
HTH_8
PAS_4
AAA_2
AAA
Mg_chelatase
PAS_10
nSTAND3
AAA_16
AAA_22
AAA_30
AAA_3
TIP49
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AMK78151
UniProt:
A0A126T7V2
LinkDB
All DBs
Position
3674255..3676039
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AA seq
594 aa
AA seq
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MDHKRQRDKPLILMLDDNPVNLEELAGLVDEAGFDVLRAETGEIALVQAVAQLPDLILLD
VLMPGMDGFTVCQTLKTIPTTRDIPVLFMTALADTADKLKGFQVGAVDYITKPFQYEEVL
ARVQTHLTLQKLKLELQEKEQRLSRIFENAMDAILTLDEAGRITLFNTAAEQMFRCKAAD
NIGRAVDRFLSPELYKTLTNFRNGVPAEQAIWVSEGMSAVRADESIFPIEATISRVEAIG
QKLYILILRDINERKARQQAEAECNTLRGINLYLQEEVLASRDGEELIGNSPALHQAMDL
VRQVANTDATVLITGETGTGKELIARAIHNLSARKDKTLVKLNCATIPENLAESELFGHE
KGSFTGAIARKLGRFELANGGTLFLDEIGELPLEMQAKLLRVLQEGEFERVGGTQTLTCD
VRVIAATHRDLAQFSQQGKFRADLYYRLNVFPINLPPLRERKEDVPFLVKHFIDKYAAKF
GKKIQSIPERMMADLQSYFWPGNIRELQHIIERAVILTKGTQLAAVDCVNVVGAGAPTAA
PIVTLDEAERAHILKALEATSWRIAGNQGAAKILGVPSTTLRSRMEKLGISKPA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggatcataaacggcagcgcgataaaccgttaatcttgatgttggacgataatccggtc
aatctggaagaattggcgggcttggtcgatgaagccgggtttgacgtgttgcgcgcggaa
acaggagaaattgccttggtgcaggctgtcgcccagctgcccgatctgattttgctggat
gtactgatgccgggcatggacggctttaccgtctgccagaccctgaaaaccattcccacg
acccgcgatattccggtgttattcatgaccgccttggcggataccgccgataaattaaaa
ggctttcaagtcggagcggtcgattacatcaccaagccgtttcaatacgaggaggtgctt
gcccgcgtacaaacccacctgacgctgcagaagttgaagctggagttgcaggaaaaggaa
caacgcctgtcgcggattttcgagaacgcgatggatgctattctgacgctggacgaagcc
gggcggattaccttgttcaacaccgcggcggaacagatgtttcgttgcaaggccgccgac
aatattggccgggcggtggatcgattcttgtcacccgagctttataaaaccctgaccaat
tttcgtaacggagtgccggcggagcaagcgatctgggtctcggaaggtatgagtgcggta
cgtgccgacgaaagtatttttcccattgaagccaccatctcccgggtggaagccatcggc
cagaagctttacatcctgattctgcgcgacatcaacgaacgcaaggcccggcaacaggcg
gaagcggaatgcaataccttgcggggcatcaatctttatttgcaagaagaagtcttggcc
agcagggacggcgaggaattgatcggcaactccccagcattgcatcaggccatggatctg
gtgagacaggtagcgaacaccgacgcgacggtgttgatcaccggcgagaccggcaccggc
aaggagttgatcgccagggcgattcataatcttagcgcgcgcaaagacaagaccctggtg
aaattgaattgcgcgacgattccggagaatttggcggaaagcgaattgttcggtcacgaa
aaaggctcgtttaccggggcgattgcccgcaaattggggcgtttcgaactggcaaacggc
ggcaccttgtttctcgatgaaatcggcgaattgccgctggaaatgcaggccaaactgttg
cgggtgctacaggaaggcgagttcgaacgggtgggcggtacgcaaaccctgacttgcgat
gtgcgggtaattgccgccacgcatcgggacttggcgcagttttctcagcagggtaaattt
cgcgccgacttgtattaccgcctgaacgtatttcctatcaatttgccgccgctacgcgag
cgcaaggaagacgtgccgtttttggtgaaacatttcatcgataaatacgcggcaaaattc
ggcaagaaaattcagtcgattccggaacggatgatggccgatctgcaaagctatttttgg
cccggcaatattcgcgaactgcaacatatcatcgaacgcgcggtgattttaaccaagggt
actcaactggccgccgtcgattgcgtgaatgtggtcggtgcaggcgcgcccaccgcagcg
ccgatagtcacgctggacgaagccgagcgcgcgcatattctgaaagcgctggaagcgacg
tcctggcggattgccggcaatcagggcgccgcgaagattttgggcgtgccatccacgacc
ttgcggtcgcgaatggagaagctggggatcagtaaaccggcctga
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