Methylomonas denitrificans: JT25_018040
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Entry
JT25_018040 CDS
T04191
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mdn
Methylomonas denitrificans
Pathway
mdn00260
Glycine, serine and threonine metabolism
mdn00460
Cyanoamino acid metabolism
mdn00630
Glyoxylate and dicarboxylate metabolism
mdn00670
One carbon pool by folate
mdn00680
Methane metabolism
mdn01100
Metabolic pathways
mdn01110
Biosynthesis of secondary metabolites
mdn01120
Microbial metabolism in diverse environments
mdn01200
Carbon metabolism
mdn01230
Biosynthesis of amino acids
mdn01240
Biosynthesis of cofactors
mdn04981
Folate transport and metabolism
Module
mdn_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JT25_018040 (glyA)
09102 Energy metabolism
00680 Methane metabolism
JT25_018040 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JT25_018040 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JT25_018040 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JT25_018040 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JT25_018040 (glyA)
Enzymes [BR:
mdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JT25_018040 (glyA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Cys_Met_Meta_PP
BRD4_CDT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AMK78366
UniProt:
A0A126T8G4
LinkDB
All DBs
Position
complement(3916126..3917385)
Genome browser
AA seq
419 aa
AA seq
DB search
MFSKSMTIEGFDNELFRAMEQERQRQEDHIELIASENYASPRVLEAQGSLLTNKYAEGYP
EKRYYGGCEYVDLVEQLAIDRAKELFGADYANVQPHSGSQANMAVFMSLIQPGDTILGLS
LADGGHLTHGAKPNFSGKIYNAIQYGLNKDTGEIDYEQVEALALEHKPKLIIAGFSAYSR
IWDWQRFRDIADKVGAYLVVDMAHVAGLVAAGLYPNPVPIADVVTSTTHKSLRGPRGGLI
LCKSNPDLEKKINSNIFPGIQGGPLMHVIAAKAVAFKEALTPEFKTYQQQVVKNARAMAE
VFIKRGFDVVSGGTDNHLMLVSLIPKGITGKAADAALGRAHITVNKNAVPNDPQSPFVTS
GIRVGTPAPTSRGFKEDEVRQVAHLMCDVMDNIEDESVIDAVREKVHLLCARFPVYAAA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcaaatcgatgaccattgaaggttttgataacgaattattccgggccatggaa
caggagcggcaacgccaggaagaccatatcgaactgatcgcctcggaaaactacgccagc
ccccgcgttctggaagcgcaaggctcgttgctgaccaataaatacgcggaaggttatccg
gaaaaacgttattacggcggctgcgaatacgtagacttggtcgaacaactggctatcgac
cgcgccaaggaattattcggtgccgattacgccaacgtccagccgcattccggttcgcaa
gccaatatggcagtgttcatgtcgctgatccaacccggagacaccatcctgggcttgagc
ctggccgacggcggccatttaacccacggcgccaaacccaatttctccggcaaaatctac
aacgcgatccagtacggtttgaataaagacaccggcgaaattgattacgagcaagtcgaa
gcgctggccttggagcataaacccaagttaatcattgccggcttctcggcctactcgcgg
atttgggactggcagcgcttccgcgacatcgccgataaagtcggcgcttatctggtggtg
gacatggcccacgtcgccggtttggttgcggctggtttataccccaatccggtacctatc
gccgacgtggtcaccagcaccacccacaaatccctgcgcggtcctcgtggcggcttgatc
ttgtgcaagagcaatccggacctggaaaaaaagatcaattccaacattttccccggcatt
caaggcggaccgctgatgcacgtgatcgccgcgaaagcggtagcgtttaaagaagccctg
accccggaatttaaaacctaccagcaacaagtcgtgaaaaatgctcgggcgatggccgaa
gtgtttatcaaacgcggctttgacgtagtttccggcggcaccgataaccacttgatgctg
gtgtcgttaatcccgaaaggtattaccggcaaagccgccgacgccgccttgggccgcgcc
cacatcaccgtcaacaaaaacgccgtccccaacgacccgcaatccccgttcgtcaccagc
ggcatccgcgtcggcacccctgcccccacctcgcgcggctttaaggaagacgaagttcgc
caagttgcgcatttgatgtgcgacgtgatggataacatcgaagacgagagcgtgattgat
gcggtgagggagaaagtgcatttgttgtgcgcacggtttccggtttatgctgcggcttag
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