Methylomonas denitrificans: JT25_021205
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Entry
JT25_021205 CDS
T04191
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mdn
Methylomonas denitrificans
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdn03032
]
JT25_021205
03400 DNA repair and recombination proteins [BR:
mdn03400
]
JT25_021205
Enzymes [BR:
mdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JT25_021205
DNA replication proteins [BR:
mdn03032
]
Prokaryotic type
DNA Topoisomerases
JT25_021205
DNA repair and recombination proteins [BR:
mdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JT25_021205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF5748
Motif
Other DBs
NCBI-ProteinID:
AMK78971
UniProt:
A0A140E6E7
LinkDB
All DBs
Position
4618713..4621322
Genome browser
AA seq
869 aa
AA seq
DB search
MSDFAKEIIPVNLEDEMKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELGNDWN
KPYKKSARIVGDVIGKYHPHGDTAVYDTMVRMAQPFSLRYMLIDGQGNFGSVDGDSPAAM
RYTEVRMSKIAHELLADLDKETVDFVANYDESESEPTVMPTRVPTLLVNGSSGIAVGMAT
NIPPHNLGEIISACLALIENPDLTIPELMQIVPGPDFPTAGIINGASGIFEAYATGRGRI
YLRGRSHFEDIGDSGRQAIITTELPYQVNKARLLEKIAELVKEGKLDGISGLRDESDKDG
MRMVIELRRGEVPDVVLNNLYKQTQMQTVFGINMVALYDGRPHLMGLKEILAAFVDHRRE
IVTRRTIYNLRKARERAHILEGLAVALANIDEMIELIKTSPNPQEAKVGLLAQTWQAGLV
AALLDRADADRSRPDDLSVEFGLVDGAYRLSENQAQAILDLRLHRLTGLEQEKIVNEYKQ
LLELIDEYLHILGNDVRLMEVIREELEEIRNQYADPRRTEIVQDYSNLSAEDLITEEDMV
VTMSHEGYVKTQPLSDYKAQRRGGRGKSATATKENDFVEKLIIANTHDTILCFSSSGKVY
WLRVFNLPVASRASRGKPFVNLLPLDEGEKINAMLPVREYSADKYIFMATSSGTVKKTPL
PEFERQRSNGKIAIDLNENDTLVGVAITDGQQNVLLFSSDGKAVCFNETDVRSMGRTATG
VRGIRLQEGQKVISLIISTEGTVLNITENGYGKRTKLEEFTQHRRGGQGLIAIQTSERNG
AVVGAVLVNDTDEIMLITDGGILVRTRVKEISVVGRNTQGVTVIRLDKGERVVGVDRIDG
LGDEEDDVDGEVDENDVVADSAEQGGEEE
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttcgctaaagaaattatccccgtcaatctcgaagacgagatgaaacaatcc
tacctcgattatgccatgagcgtgatcgtcggtagggcacttcccgatgtcagagacggc
ctgaagccggtccaccgtcgcgtactgtacgcgatgaacgaactaggaaacgattggaac
aaaccctataaaaaatcggcgcgtatcgtcggtgacgtaatcggtaaataccacccgcac
ggcgatacagctgtttacgacaccatggtgcggatggcacagccgttttccttgcgctac
atgctgattgacggccaaggtaacttcggttcggtggacggcgattcgccggcggcgatg
cggtataccgaagtgcgtatgtcgaaaatcgcccacgaattgctggccgacctggataag
gaaaccgtcgatttcgtcgccaactacgacgaatcggaatccgaaccgaccgtgatgcca
acccgggtaccaaccctgttggtcaatggctcttccggtatcgcggtcggtatggccacc
aatattccgccgcataatctgggtgagattatcagcgcttgtctggcgctaatcgaaaac
cccgatctgactattcccgaattgatgcaaatcgtgccgggacctgattttccaaccgcc
ggcatcattaacggtgcgtccggtatttttgaagcgtatgcgaccggtcgcggccgtatt
tatttgcgcggccgcagtcatttcgaagatataggcgatagcggccgtcaagccattatt
actactgagctaccttaccaggtcaacaaagcccgcttgttggaaaaaatcgccgaactg
gtcaaggaaggcaaactggacggtatctccggcctgcgcgacgaatccgacaaggacggt
atgcgcatggtgattgagctgcggcgcggcgaagtgcctgacgtggtgctgaataatctg
tacaaacaaacccagatgcagaccgtatttggtatcaatatggttgctctgtatgacggt
cggccgcatttgatgggtctgaaagagattctggcggcatttgtcgatcaccgccgagag
atcgtcacccgcagaacgatttataacctgcgtaaggcgcgggaaagggcgcatatcctg
gaaggtttggccgttgcgttggctaacatcgacgaaatgatcgagctgatcaaaacttcg
ccgaatccgcaagaagccaaagtgggcttactggcccaaacctggcaagccggtttggtt
gccgcattgctggatagagccgacgccgatcgttcgcggccggatgatttatccgttgaa
tttggcctggtagacggcgcgtatcgcttatccgaaaatcaggcgcaagcaatcctggat
ttgcgtctgcatcgcttgaccgggttggagcaagaaaaaatcgtcaacgaatacaagcaa
ttgctggaactgatcgacgaatacctgcatattctcggcaacgatgtgcgcttgatggaa
gtgatacgcgaagaactggaagaaatcagaaatcaatacgccgatccacggcgtaccgaa
atcgtccaggattattccaatctgtccgccgaagatctgattaccgaagaggacatggtg
gtgacgatgtcgcatgaaggctatgtgaaaacgcagccgctcagcgattacaaagctcag
cgccgcggcggtcgcggcaagtcggcaacggcgacgaaggaaaacgatttcgtcgaaaaa
ttgatcatcgccaatacccacgacactattttgtgtttctcgtcgtcgggcaaagtctat
tggttacgggtatttaatttgccggtcgccagccgggcgtcgcgcggcaagccgttcgtg
aatttgttgccgttggatgaaggcgagaaaatcaatgcgatgttgccggtgcgtgaatac
agcgctgataaatacatctttatggcaacctcatcgggtaccgtgaagaaaaccccgttg
cccgaatttgaaaggcagcgcagcaacggcaaaatcgccatcgatttgaacgaaaacgat
acattggtgggcgtggcgattaccgacggccagcaaaatgtattgctgtttagcagcgac
ggcaaagcggtgtgcttcaacgaaaccgatgtacgctcgatgggccgaacggctaccggt
gtacgcggcattcgcttacaggaaggtcaaaaggtcatttcgctgattatctcaaccgaa
ggcactgtgttgaatatcaccgaaaacggttacggcaaacgcaccaaactggaagagttt
acccagcatcgtcgcggcggtcagggtttgatcgcgatccagacctccgagcgcaatggc
gcggtagtgggcgcggtattggtgaacgataccgacgaaattatgttgatcaccgacggc
ggcatattggtgcggactcgggttaaggaaatttcagtggttggtagaaatacccaaggc
gtaaccgtaattcgtctggataagggcgaaagagtggttggcgtggatcgaatcgatggt
ctcggcgatgaagaggatgatgttgacggcgaagtcgatgaaaacgatgttgtagcagat
agcgccgaacaaggcggagaagaggaataa
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