Methylomonas denitrificans: JT25_023180
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Entry
JT25_023180 CDS
T04191
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mdn
Methylomonas denitrificans
Pathway
mdn00300
Lysine biosynthesis
mdn00470
D-Amino acid metabolism
mdn01100
Metabolic pathways
mdn01110
Biosynthesis of secondary metabolites
mdn01120
Microbial metabolism in diverse environments
mdn01230
Biosynthesis of amino acids
Module
mdn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JT25_023180
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JT25_023180
Enzymes [BR:
mdn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JT25_023180
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AMK79353
UniProt:
A0A140E7H9
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All DBs
Position
5077511..5078737
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AA seq
408 aa
AA seq
DB search
MNRSLARVTEAVHLACTDEPLCAYIYDLAALDSHAAELAATLPSNCELFYAVKANSDLPI
LQTLAPYVRGFEVASGGELDWVRRHFPDTPVIFGGPGKLDTELAAALEQDVELLHVESLG
ELRRLAWLARSTDRQADVLLRINLALGGVPATTLTMGGRATPFGIDSGQLPQCLTWLARH
PEIRLHGFHFHLMSHQLDADAHLALLSRYFRQARQWREQFGLTINHLNVGGGIGINYREP
ERQFDWPAFSAGLTALVESENMQDWRIRFEPGRYLTAACGYYAMQVLDIKQCFGRHFAVG
RGGTHHFRTPYAQGHSHPFLVLPREHWPYPFPRPGVEQTEITVVGQLCTPKDVLATDAPV
GRLRVGDLLVFPYAGAYAWHISHHDFLRHLHPRHIYLSAQEPVHAANQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgatcgttagcgcgagtgacggaagccgttcatctcgcctgcaccgatgagccg
ctgtgcgcctatatctacgacttggcggcgctggatagccatgccgccgagttggccgca
acactgccgagcaattgcgaactcttttatgcggtcaaagcgaattccgacctgccgatc
ttgcaaacgctggcgccgtatgtgcgcggtttcgaggtcgcatccggcggcgaactggac
tgggtccgccgccatttccccgatacgccggtgattttcggcggtcccggcaagctggat
accgagctagccgccgcgttggagcaagacgtggaattgctgcacgttgaaagcctgggt
gaattgcggcggctggcctggctggcccgaagtacggacaggcaggccgatgtgctgctg
cgtatcaatcttgcgttgggcggtgtaccggccaccaccttgaccatgggcggccgggcc
accccgtttggtatcgattcaggccaactgccccaatgcctgacatggctggcacgacac
ccggaaatccgtttacatggcttccacttccacctgatgtcccaccaattggacgccgat
gcccatctggccttgctttcgcgttacttccgtcaggcgcggcaatggcgggagcaattc
gggctcactattaaccacctcaacgtgggcggcggcatcggcatcaattaccgcgaaccc
gagcggcaattcgactggccggcgttcagtgccggtttgacggcattggtcgagagcgaa
aacatgcaggactggcgcatccgcttcgaaccgggccgttacctgaccgcggcctgcggc
tattacgcgatgcaggtgctggacatcaagcaatgcttcggccgccatttcgcggtcgga
cgcggcggcacccaccatttccgcacaccctacgcccaaggccacagccatccgtttttg
gtattgccgcgcgaacactggccctatccgtttccccggcccggcgtcgaacagaccgaa
atcaccgtggtcggccagctctgcactccgaaagatgttttagccaccgacgcaccggtg
ggacggttgcgggtcggcgacctgctggtgtttccttatgccggcgcttatgcctggcat
atatcccaccacgactttctgcgccacctgcacccgcggcatatctatctatcagcgcag
gagccggttcatgctgcaaaccaataa
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