Monodelphis domestica (gray short-tailed opossum): 100009766
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Entry
100009766 CDS
T01031
Symbol
IFT57
Name
(RefSeq) intraflagellar transport 57
KO
K04638
intraflagellar transport protein 57
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo05016
Huntington disease
mdo05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100009766 (IFT57)
05022 Pathways of neurodegeneration - multiple diseases
100009766 (IFT57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mdo03037
]
100009766 (IFT57)
Cilium and associated proteins [BR:
mdo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
100009766 (IFT57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
MCPsignal
Mod_r
COG3_N
DUF1664
Motif
Other DBs
NCBI-GeneID:
100009766
NCBI-ProteinID:
XP_001362126
Ensembl:
ENSMODG00000018047
UniProt:
F7GEN6
LinkDB
All DBs
Position
4:complement(67632203..67715574)
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AA seq
431 aa
AA seq
DB search
MAVAAAVVPPVSVEDTVLRGRGGDASGEGLYVERGPGAAYHMFVVMEDLVEKLKLLRYEE
EILRRNNLKPLSRHYFALPTNPGEQFYMFCTLAAWLINKAGCPFEQPQEYDDPNATISNI
LSELRSFGRSADFPPSKLKSGHGEHVCYVLDCLAEEALKYVGFSWKRPVYPVEELEEETV
PEDDAELTVNKVEEEIVEEETDNEENFIDLNVLKAQTYRLDMNESAKQEDILESTTDAAE
WNLEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSEIESALKETKGFLDKLHNEISRTLE
KISSREKYINNQLEHLVQEYRAAQAQLSEARERYQQGNGGVTERTRILSEITEELEKVKQ
EMEEKGSSMTDGAPLVKIKQSLTKLKQETVQMDIRIGVVEHTLLQSKLKEKSNMTRDMHA
TIIPESAIGSY
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggctgtagccgcggccgttgtgccgccggtaagcgtggaggacactgtgcttcggggc
cgtggcggggacgcgagtggggaaggcctgtacgtggaacggggccccggcgcggcctac
cacatgttcgtggtgatggaagacctggtggagaagctaaagctcctgcgctacgaagag
gagatcctgcgcagaaacaatttgaaaccgctgtccagacattattttgctttgcctacc
aatccaggtgaacagttttacatgttttgcactcttgctgcttggctaattaataaagca
ggatgcccctttgaacaaccacaggaatatgatgaccccaatgcaacaatatctaatata
ttatctgagcttcgatcatttggaaggtctgcagattttcctccatcaaagttaaagtca
ggtcatggagagcatgtatgctatgttcttgattgtttagctgaagaagccctaaaatat
gttggtttcagctggaaaaggccagtatacccagtagaagaattagaagaggaaacagtt
ccagaagatgatgcagaattaacagtaaacaaagttgaggaagaaattgtggaagaggag
actgacaatgaagaaaactttattgatctcaatgttttaaaggcacagacctaccgattg
gatatgaacgagtctgccaaacaagaagatattttggaatctacaacagatgctgcagaa
tggaatctagaagtggaacgtgtactaccacaactgaaagtcacgattcgaactgataat
aaggactggaggatccacgttgaccaaatgcaccaacacaaaagtgaaattgagtctgct
ttaaaagagacaaagggatttttggacaaacttcataacgagatcagtagaaccctggaa
aaaatcagcagccgagaaaaatacatcaacaatcagcttgagcatttggttcaagagtat
cgtgctgcccaagcccagctgagtgaggcaagagaaagataccagcagggaaatggcgga
gtaactgaaagaactagaatcctttcagagattacagaagaattagaaaaggtaaaacag
gaaatggaagaaaagggcagcagcatgactgatggtgctcctttggtaaagattaaacag
agcttaaccaaactgaagcaagaaacagtccaaatggacattagaattggagtagtggaa
cacacattactccagtcaaaactaaaggagaagtcaaatatgactagggatatgcatgca
acaatcattccagaatctgcaataggttcttattaa
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