Monodelphis domestica (gray short-tailed opossum): 100009975
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Entry
100009975 CDS
T01031
Symbol
SOX5
Name
(RefSeq) SRY-box 5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100009975 (SOX5)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100009975 (SOX5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100009975
NCBI-ProteinID:
XP_001362305
Ensembl:
ENSMODG00000017704
UniProt:
F7FUS2
LinkDB
All DBs
Position
8:94092763..95396368
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AA seq
763 aa
AA seq
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MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPN
KPHSEEFQPVSLLTQESCGHRTPTSQHNTVEVDGNKVISSFAPHNSSTSPLKAEEGGRQS
GESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM
GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLL
PPGFSYKAGCSDPYPVQLIPTTMAAAAGATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGI
PQGNLGAAVSPTSIHTEKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPAL
RINSGAGSLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGK
VAVVNSLGLSNCRTEKDKTTLESLTQQLAVKQNEEGKFSHAMMDFNMSGDSDGSAGVSES
RIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNL
EKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYF
NVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEP
HIKEEMQADDINGEIYDEYDEEEDDPDVDYGSDSENHIAGQAN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgctaactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaa
gaagaggagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaac
aagcctcactctgaggaatttcaaccagtttctcttctgacgcaagagagttgtggccat
aggactcccacttctcagcacaacacagtggaagttgatggcaataaagtgatatcttca
tttgccccgcataactcatctacctcacccctgaaggcagaagaaggtgggcgtcagagc
ggagagtcattgtccagtacagccctggggaccccagaaaggcgcaaaggcagcttagct
gatgttgtagataccttgaaacaaagaaaaatggaagagctcatcaaaaatgaaccagaa
gaaacccccagtattgaaaagctcctatcaaaggactggaaagacaagcttcttgctatg
ggatcagggaactttggagaaataaaaggaactccagaaagccttgctgagaaagagagg
cagctcatgggtatgatcaatcagctgaccagtttgagagaacagctgctggcagctcat
gatgaacagaagaagctggctgcctcccaaattgagaaacagcgccagcaaatggagctg
gccaagcagcagcaagaacagattgcaagacaacagcagcagcttctacaacaacaacac
aaaatcaatctgctccaacaacaaatccaggttcaaggtcagctgcctccattaatgatt
ccagtattccctccagaccagcgaacactggcagcagctgcccagcaaggattcctcctt
cctccaggcttcagctacaaggcaggatgtagtgacccttaccctgttcagctgatccca
actaccatggcagctgctgccggggcaaccccaggcttaggcccactccaactgcagcag
ttatatgctgcccagctagctgcaatgcaggtatcaccaggaggaaagttaccaggcata
ccccaaggcaaccttggtgctgctgtatctccaaccagcattcatacagagaagagcaca
aatagcccaccacccaaaagcaaggatgaagtggcacagccactgaacttgtctgctaaa
cccaagacctctgatgggaaatcacccacctcacccacctctccccatatgccagctctg
agaataaacagtggggcaggctctcttaaagcctctgtcccagcagcattagccagtcct
tcagctagagttagcacaataggttatttaaatgaccatgatgctgttaccaaggcaatc
caagaagctcgacagatgaaggagcaacttcggcgggaacaacaggtgcttgatgggaag
gtggctgttgtgaatagtctggggctcagtaactgcagaacagaaaaggacaaaacaaca
ctggagagcctgactcagcaactagcagtgaaacagaatgaagaaggaaaattcagccat
gccatgatggacttcaatatgagtggagattctgatggcagtgccggggtctcagaatcc
agaatttatcgggaatccagagggcgtgggagcaatgaacctcatatcaagcgtcccatg
aatgctttcatggtatgggctaaagatgaacggaggaaaatccttcaagcttttcctgac
atgcataattctaacatcagcaagatactgggctctcgttggaaagcaatgacaaaccta
gaaaaacagccatactatgaagaacaggctcgacttagcaaacaacacctggagaaatat
cctgactataagtataagccaaggccgaagcgaacctgccttgtagatggaaaaaaattg
aggattggtgaatataaagcaattatgcggaatagacgtcaagagatgaggcaatatttt
aacgttgggcaacaagcacagatcccaattgccactgccggtgttgtctatcctggagcc
attgccatggcaggaatgccctcccctcatctgccctcagagcactcaagtgtatccagc
agtccagaacctgggatgcctgtgatccaaagcacttatggtgtaaaaggagaggagcca
catatcaaggaggagatgcaggctgatgatatcaacggagaaatctacgatgagtacgat
gaagaagaggatgacccagatgtggactacggcagtgacagtgaaaatcatattgctggg
caagccaactga
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