Monodelphis domestica (gray short-tailed opossum): 100010056
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Entry
100010056 CDS
T01031
Symbol
ZBED1
Name
(RefSeq) zinc finger BED-type containing 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100010056 (ZBED1)
04121 Ubiquitin system [BR:
mdo04121
]
100010056 (ZBED1)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
100010056 (ZBED1)
Ubiquitin system [BR:
mdo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
100010056 (ZBED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
PRRSV-NSP11_N
Gluconate_2-dh3
Motif
Other DBs
NCBI-GeneID:
100010056
NCBI-ProteinID:
XP_007501066
LinkDB
All DBs
Position
7:47676360..47688834
Genome browser
AA seq
695 aa
AA seq
DB search
MENKSLESSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKLKPESSQQVVQDTLIMKTSHSYEN
KKHQELTSAVISLICEGMYPSSIVDEPTFKTLLKTADPRYELPSRKFFCTKAIPEKYNAV
REIVLKELTDILWCGISTDIWRSQNQNRSYVTLAVHFLNSSSSHCLTVNSRCLKTFEVPE
ENTAETITRVLYEIFIEWGINTKVFGATTDYGKDIVKACSLLDIPVQMPCLGQTFNAGIQ
QAFQLPKLGSLLTRCRKLVEYFQQSTVAMYMLSEKQKQQNIMHCMLVSDRVSWWGSTLAM
LQRLKEQQFIIAAVLVEDSNNHHLMLETSEWNTIEGLVDLLHPFKQVAEMMSASKYPTIS
MVKPLLHMLLNTTLNIKENDSKEISMAKEVIAKELSTTYQETPEIDMFLNVATFLDPRYK
KLPFLSAFERQQVENRVVEEAKSLLEKVKENSFRPEEKLFSLSEEPPVKKMIISSTPPPT
SAINNMLAEIFCQTGGVEDQEEWHAQIVEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCILATRVFPERLFGSSANVVSAKRNRLAPAHVDEQIFLYENTRNGSEAEPED
EDEGEWGLEQEQIYTLSDTVNVSNNFFNIRDSGFI
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaagcttagaaagttcaccatcagacctaaagttagtggctcacccgaga
gcaaaaagcaaagtatggaaatacttcggtttcgataccaatgcagaaggatgcatattg
cagtggaagaagatctactgccgcatttgcatggcacagattgcctattcaggaaacact
tccaacctttcataccacctggagaaaaatcatccagatgaattttgtgaatttgtaaag
agtaacactgaacagatgagggaggcctttgctactgccttttcgaaactgaagccagag
tcctcacagcaggttgttcaggacactttaatcatgaagaccagccacagctatgaaaac
aaaaagcaccaggagctgacctctgcggtgattagcctaatttgtgagggcatgtatcct
tcttccatagtggatgagccaacatttaagactcttttgaaaacagcggatccaagatat
gaacttcctagcagaaaatttttctgcacaaaagcaattcctgaaaagtacaatgcagtt
agagaaatagtcttgaaagaactgactgacattttgtggtgtggaatatccactgatatt
tggagaagtcaaaaccagaataggtcttatgtgacccttgcagttcatttcctcaatagc
agctcttctcattgtttgactgttaactcaagatgcttaaaaacatttgaggtccctgaa
gaaaatactgcagagacaattacgagagtcctttatgagatcttcattgagtgggggatc
aacacaaaagtttttggtgctacaacagattatggcaaagatattgtgaaagcttgctca
cttctagatattccagttcagatgccttgtttgggccagactttcaatgcaggaatacaa
caagctttccagctccctaagctgggtagtctcttgacaaggtgccgaaaactggtggag
tattttcagcagtctacagtagccatgtacatgttaagtgagaaacagaaacagcagaac
atcatgcactgcatgctggtgagtgatcgtgtctcctggtggggaagcacacttgccatg
ttgcagcgactgaaggagcagcaatttatcattgcagctgttttagtagaagatagcaat
aaccatcaccttatgttggagaccagtgaatggaacaccattgaggggctggtggacctg
cttcatccctttaaacaagtggctgagatgatgtctgcatccaagtatcccacaataagc
atggtaaaaccccttcttcatatgcttctcaacacaactctaaacatcaaagaaaatgat
tctaaagaaatcagtatggcgaaggaagtgatagccaaagagttgtcaacaacataccag
gagacccctgagatagacatgttccttaatgtggcaacgttcctggatcctaggtataag
aaactgccattcctctctgcatttgaacggcagcaggttgaaaacagagttgtagaagaa
gcaaaaagtcttttggaaaaagtaaaagaaaatagtttcaggcctgaagaaaagctcttt
tcactatctgaagaaccaccagtaaaaaaaatgatcatttcttccaccccacccccaact
agtgcaattaataacatgctggcagaaatcttctgccaaacaggtggtgtggaagatcaa
gaagagtggcatgcccaaattgtggaggaattgagcaactttaaatctcaaaaagtactt
ggcctaaatgaagatccactcaagtggtggtctgaccgattggccttgtttcctgtctta
ccaaaggtacttcagaagtattggtgtattttagctacaagggtcttccctgaacgactt
tttggttcgtctgccaatgttgtaagtgctaagaggaacagactagctccagctcatgtg
gatgagcaaatttttttatatgaaaacactcgaaatgggtctgaagctgaacctgaagat
gaggatgagggagaatggggcttggaacaggaacagatttatactttaagtgacacagtt
aatgtaagcaacaatttctttaatataagagacagtggattcatctga
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