Monodelphis domestica (gray short-tailed opossum): 100010183
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Entry
100010183 CDS
T01031
Symbol
SS18
Name
(RefSeq) SS18, nBAF chromatin remodeling complex subunit
KO
K15623
protein SSXT
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03082
ATP-dependent chromatin remodeling
mdo05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100010183 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100010183 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdo03036
]
100010183 (SS18)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100010183 (SS18)
GBAF(ncBAF) complex
100010183 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
100010183
NCBI-ProteinID:
XP_001362192
Ensembl:
ENSMODG00000021510
UniProt:
F7FSI0
LinkDB
All DBs
Position
3:257807806..257906578
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTTECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMSSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSNHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQPYPG
QQQGYGPSQSGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgttcgctgctccgaggcagcggggcaagggcgagatcactcctgcggca
attcaaaagatgttggatgaaaataaccatcttattcaatgtataatggattatcagaat
aaaggaaagactacagaatgctctcagtatcaacagatgttacatacaaatttggtttac
cttgccacgatagcagactccaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtccaggagggatgaatcagagtggccctcccccacctccacgc
tctcacaacatgtcttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggccaaaccatatgcctatgcagggacctggacct
aatcaacttaatatgacaaacagttccatgaacatgccttcaagtaatcatggttctatg
ggaggttataaccattcagtgccatcctcacagagtatgccagtacagaatcagatgacc
atgagtcaaggacagcctatgggaaactatggccctagaccaaatatgaacatgcaacca
aaccaaggtccaatgatgcatcagcagcctccttcacaacagtataatatgccacaggga
ggtggtcagcattatcaaggacaacaaccccctatgggaatgatgggtcaagttaaccaa
gggaatcatatgatgggtcaaagacagattcccccttacaggccacctcagcaaggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggagggaattcacaatatggtcagcagcaagatgcatatcaaggaccacct
ccccaacagggttatccaccccaacaacaacaatatccaggtcaacagccttatccagga
cagcagcagggttatggtccttcacagagtggtccagggcctcagtatcccaactaccca
cagggacaaggtcagcagtatggggggtacagacctacacaacctggaccaccacagcca
ccccaacagaggccttatggatatgaccagggtcagtatggaaattaccagcagtga
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