Monodelphis domestica (gray short-tailed opossum): 100010730
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Entry
100010730 CDS
T01031
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat containing 6B
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100010730 (TNRC6B)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100010730 (TNRC6B)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100010730 (TNRC6B)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100010730 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
M_domain
RRM_1
Motif
Other DBs
NCBI-GeneID:
100010730
NCBI-ProteinID:
XP_016280928
LinkDB
All DBs
Position
8:complement(63364708..63557402)
Genome browser
AA seq
1842 aa
AA seq
DB search
MSLELNPLSPPPHRNRWQKRRSGHLFLPYLCVSAAFCTDSVPMQTDEGEILEESCSEEGH
EDLVMEGHGKTPPPGEESQQEKEQEREEQLMEDKKRKKEDKKKKEAAQKVTAKKSCLPEV
TKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAARYMPREVPPRFRCQQDHK
VLLKRGQPPPASCMLLGGGAGPPPSTTPGANPNNAQVTGALLQSESGPASDSSIGGAAAS
NYANSTWGPGASSSNGTAANPTPTWDKVIVDGSDMDEWPCIASKDTEASSENTTENNSAS
NPGSEKSPLPGSTTSHKGKGSQGPPGSAGSECNLGVWKSDPKAKSVPPSISAAENSSGLG
TWRNVGGQERVGPASGFSSFNPNSNPSAWPALVQESGSRKGALEAENSSPSAQGAVVGQV
SREQPSKMENAGVNYVVSGREQAPVHNTDGPKSGNTNSLNLSSPNPAENKGVPFGAGLGS
CSRGADAPSQSTGDRQPGNAGSRGSGRGSSGTDTVSGQSNSGNNGNNGKEREDSWKGASG
QKSAGSKNDSWDNNSRSTGGGSWNFGPPDPNENKWGEGNKMASGVSQGEWKQPTGSDELK
IGEWSGPNQPNSSTGAWDNQKGHPLPENQGNSQAPCWGRSSSSTGSEVGGQSTGSNHKAG
SSDSHNSGRRSYRPNHPDSQAVLQTLLSRTDLDPRVLSNTGWGQTQIKQDTIWDIEEMPR
PEGKSDKGTEGWESSTTQTKNSGGWGDGPSQSNQIKSGWGELSTPTEWKDPKNTGGWNDY
KNNNSSNWGGARPDEKASSSWNDNNSSKDQGWGGRQPNQGWTSGKNGWGEEVDQTKNSNW
ESSGSKPATGWGEGGQNEIGTWGNGGNANLTSKSGWDDCKRSPAWTNETARQSSSWNKQH
QQQPPPQQQPQPPQQQQQQQQQQQEASGSWGAPPQPPPPGNGRPSNPSWNSGPQPSVPKD
EEPSGWEEPSPQSISRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGQAPREQSLPTPM
TSKTSSVWSKSTPPAPDNGTSAWGEPNEASPGWGDMDETGASSTGWGNTPSSAPNAMKPN
SKSMQDGWGESDGPVTGTRHPSWEEDDDGGVWNTAGSQGSSSSHNSAGWGQGGKKQQMKC
SLKGGNSDSWMNPLAKQFSNMGLLSQAEDGPGNKMDLSVGSLPDKKFDVDKRAMNLGDFN
DIMRKDRSGFRPPNSKDMGTTDSGPYFEKGGNHGLFGNSTAQSRGMHTPVQPLNSSPNLR
AQVPPQFISPQVSASVLKQFPNSGLNPGLFNLGPQLSPQQIAMLSQLPQIPQFQLACQLL
LQQQQQQQLLQNQRKISQAVRQQHEQQIVRMMSALQQQQQQQQQQQQQHKWVLIPGYSSG
FGSSGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQDAGMHKNGAIVPPGKARGGSPY
NQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSSHASWPPEFQPGVPWKGIQNIDP
ESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTN
VHSTSAKFTDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTSGLPRPPPGLTNPKPSSPW
SSTAPRSVRGWGAQDSRLASASAWSDGGTARPSYWLVLHNLTPQIDGSTLRTICMQHGPL
LTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTTILAEFATDEEVSRFLAQAQPPT
PAATPTAPAAAAAGWQPLETGQSQADPVGPALNLFGGSAGLGQWSSGGGSSSGGDLPGAS
LWGPPNYSSSLWGVPSVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgaattaaatcctttatccccaccaccccaccgaaacaggtggcagaagagg
aggtcaggacacctattcctgccgtatttgtgtgtttctgcagcgttttgcacagattct
gttcccatgcaaaccgatgagggagaaatattggaagaaagctgctctgaggagggacat
gaagatttggtaatggaagggcatggcaagactccgcctcctggtgaagaaagccaacaa
gagaaggagcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaagaggat
aaaaagaagaaagaagctgctcagaaggtgacagctaagaagagctgtttgcccgaagtg
acgaaaccaagtttaagccaaccaacggccgccagcccgattggcagctctccatcgcca
ccagtcaatggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccgccaagc
gccgcccgctacatgcctcgggaggtgccaccgcgattccgttgccagcaggaccacaaa
gtgttactaaaacgtgggcagccccctccagcctcctgtatgctccttgggggtggagcc
gggcctcctccttctaccacacctggagcaaaccccaacaacgcacaagtgacaggagcc
ctgctgcaaagtgagagtgggcctgcctcagattcatctatcggaggtgctgctgcttca
aattatgcaaattccacttggggcccaggagcctcctccagcaacggcactgctgccaac
cccactcccacctgggacaaggtgattgtagacgggtctgacatggatgagtggccttgt
attgccagcaaagacactgaggcttcttctgagaacaccaccgagaacaacagtgcctcg
aaccctggctcagagaaaagccctctgccgggaagcaccactagtcacaaaggaaaagga
agccagggcccacctgggagtgctgggagcgaatgtaatcttggggtctggaaatctgac
cccaaggctaaatctgttccaccttccatctctgctgcggagaacagcagtggactgggg
acctggaggaacgtgggtggtcaggagagggttggccctgcttcaggctttagcagcttc
aacccaaatagcaacccatctgcctggcctgcgctggtccaggagagtggttctaggaaa
ggggccctggaagctgagaacagcagccccagcgctcagggggctgtggtgggccaggtg
tccagagaacagccgtcaaagatggaaaatgcgggtgttaactatgttgtctccggcaga
gaacaggctccagttcataacactgatggaccaaaaagcggaaacactaactctttgaac
ttaagctcacctaaccctgcagaaaataagggcgtgccctttggggcgggcttggggagc
tgctccaggggtgctgatgccccttcacagagcactggagataggcagccagggaatgct
ggctctcggggttcaggaagggggtcttctggaactgacaccgtctctggacaaagcaac
tctgggaacaatgggaacaatggaaaggagagagaggactcctggaaaggcgcctctggt
caaaaatctgctgggtcaaaaaatgactcttgggataacaacagcagatccacaggaggt
gggtcctggaactttggcccaccagacccaaatgaaaacaaatggggtgaagggaacaaa
atggcgtctggggtctctcagggagaatggaaacagccgactgggtctgacgaattaaag
attggagaatggagtggtccaaaccaaccaaattctagcactggagcatgggacaatcaa
aagggccaccccctccctgaaaaccaaggcaattcccaggctccctgttgggggagatct
tcaagctccacaggaagtgaggttgggggtcagagcactggaagcaaccacaaagcagga
agtagtgacagtcacaattctggacgccggtcctataggcccaaccatcctgatagccag
gcggttttgcagactttgttgagccgaaccgatctagatccccgggtgctttccaacact
ggctggggccaaactcaaattaaacaggatactatttgggatattgaagagatgccaagg
cctgaggggaaatctgataaagggacagaggggtgggagagctctaccacacagaccaag
aactcagggggctggggagatggacccagccaaagcaatcaaataaagtctggatggggt
gagctctcaacccctacagagtggaaagacccaaaaaatacaggagggtggaatgattat
aagaacaataactcctctaattggggaggagcaagaccagatgaaaaggcctcttcctct
tggaatgacaacaattctagcaaggatcagggctggggaggacgtcagcctaatcaagga
tggacttcaggaaagaacggatggggagaagaagttgatcaaactaaaaacagtaattgg
gagagttcaggaagtaaaccagcaactggttggggtgaaggaggtcagaatgaaattggt
acttggggaaatggtggaaatgcaaacttgacttctaaaagtggatgggatgattgtaaa
agatctccagcctggacaaatgagacagctcgacagtccagttcctggaataaacagcac
caacaacagccaccaccgcagcagcagccgcagccaccgcagcagcagcagcagcagcag
cagcagcagcaagaggcctccggctcctggggagccccaccacaaccaccacctccaggc
aatggccggccctccaatcccagctggaacagtgggccacagccgtcagtccccaaagac
gaggaacccagtggctgggaagaaccttccccacagtccattagcaggaagatggacatt
gatgatggcacgtcagcctggggagacccaagtagttataactataagaatgtgaacctg
tgggataagaattctcaagggggtcaggccccacgagaacaaagcctgcccaccccaatg
acgagcaaaacctcatcagtttggagcaaaagcacaccacctgctccagataatggtaca
tcagcttggggtgagccaaacgaagccagccctgggtggggtgacatggatgagacagga
gcatcctccacaggctggggcaacaccccctccagtgctccaaatgccatgaaacccaac
tccaaatctatgcaagatggatggggggagagtgatgggccagtgacagggacccgccat
cccagctgggaagaagatgatgatggaggagtttggaacaccgcgggctctcagggaagc
agctcctctcataattcagcaggctggggacaaggagggaagaaacagcaaatgaagtgt
tcactaaaaggtggaaacagtgattcctggatgaaccctcttgccaagcagttttctaat
atgggattgctgagtcaagccgaggatggtccgggcaataagatggacttgtctgtaggg
agccttcctgacaagaagtttgatgtggacaagcgagccatgaatcttggggattttaat
gatatcatgaggaaggatagatctgggttccgtccacctaattccaaagacatgggaacc
acagatagcgggccttactttgagaagggtggcaatcatggtttgtttggaaatagcaca
gcacaatcacggggcatgcacacgccagtgcagccactaaactcttcccctaatctacgg
gcgcaagtgcctccccagtttatttctccccaggtttcggcctctgtgctcaagcaattt
cctaacagtggcctgaatccagggctgttcaacttgggacctcagctgtctccccaacag
atcgccatgctcagccagctgccacaaattccccagtttcagttggcctgtcagcttctc
ttacaacagcagcagcaacagcagcttctccaaaaccagagaaagatctcccaggctgtg
cggcagcagcacgagcagcagattgttcggatgatgagcgcattgcagcagcagcagcag
cagcaacagcagcagcagcagcagcacaaatgggtcttaattcccggctacagttctggt
tttggctcaagcggtatggattatggcatggttggaggaaaggaagctgggacagagtct
cgctttaaacagtggacttctatgatggaaggcctgccctctgtagctacacaagatgct
ggtatgcacaaaaatggcgccatagtaccccccggaaaggctcgaggaggatcaccatac
aaccagtttgatatcatcccaggcgatacattggggggccacacagggcctgctggcgat
agttggttacctgccaaatctccaccaacaaataaaattggaagtaaatccagccatgcc
agttggcctccagaattccaaccaggagtgccatggaaaggtatacaaaacattgaccct
gagtctgacccctatgtgaccccaggaagcgtgcttgggggtacagccacatctcccatt
gtagatactgaccaccaacttctgcgggacaacaccacagggtctaattcttccctcaac
acctcgctgccttcacctggtgcctggccctacagtgcctctgacaactcctttaccaac
gttcatagcacttcagcaaagttcactgattacaaatcaacatggtccccagatcccata
ggacacaaccccactcatctctccaacaagatgtggaaaaaccatatttcctcaagaaac
actagcgggctgccccgcccacctcctggcctgaccaatccgaaaccgtcatctccctgg
agcagcacagccccccgctcagtcaggggttggggggcccaggactccaggcttgcctca
gcctctgcctggagcgatggcggtacagctcgtcctagttactggctggttcttcacaac
ctcactccccagattgatgggtcaaccttgaggactatctgcatgcagcatggcccactg
ctgacattccatctgaacctgacccagggcacagccctgatccgatacagcaccaaacag
gaggcggccaaagcccagactgccctgcacatgtgcgtgttgggaaacactaccatcctg
gctgagtttgccacagacgaggaggtgagccggtttttggcacaagctcagccccctacc
cctgctgcgacaccaactgcgcccgctgctgccgctgctggctggcagcccctggagaca
ggacaaagccaggctgaccccgtaggccctgccctgaatcttttcggtgggtcagcaggg
ctcgggcagtggagcagtggagggggcagcagcagtgggggtgacctccctggtgcctcc
ctgtgggggccccccaactattcctccagcttgtggggggtccccagtgtggaagatccc
cacaggatgggcagccctgcccctttactacctggtgaccttctgggaggagggtcggat
tcaatctga
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