Monodelphis domestica (gray short-tailed opossum): 100010815
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Entry
100010815 CDS
T01031
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA processing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100010815 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdo03041
]
100010815 (PRPF38A)
Spliceosome [BR:
mdo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100010815 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
100010815 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
100010815
NCBI-ProteinID:
XP_001362109
Ensembl:
ENSMODG00000000644
UniProt:
F6SUR6
LinkDB
All DBs
Position
2:complement(2948740..2965052)
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AA seq
313 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEDDDDKLERAPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSP
RRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPER
SKKSHKKSRRGNE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgtacggtaaaggacgctcacagcatccacggcaccaacccgcagtacctg
gtggaaaagatcatccggactcgaatttatgagtccaagtactggaaggaggagtgcttc
gggctcacagctgagcttgttgtggataaagccatggaattgaggttcgtgggtggcgtg
tatggtggcaacatcaagccaactcctttcctgtgcctgaccttgaagatgttacaaata
cagccggagaaggatatcatagtagaattcattaaaaatgaggatttcaaatatgtccgc
atgttgggggccctgtacatgaggctgacgggcactgccattgactgctataagtattta
gaacctctatacaatgactatcggaaaattaagagccagaaccgaaatggagaatttgaa
ttgatgcacgtggatgaatttattgatgagctactacacagtgagcgggtttgtgacatc
atcctgccccggcttcagaagcgctatgtgctggaagaagctgagcagctagagccccga
gtcagtgccctggaggaggacatggatgatgtggagtccagtgaggaagaagaagaggac
gatgatgacaagctggagagggccccatccccagatcaccgtcggcgaagttaccgagac
ctggacaagccccgtcgctccccaacgctgcgctacaggcgaagccggagccgatctccc
cggagacgcagccggtctcccaaaaggaggagtccctccccccgtcgagaaagacatcgc
agcaagagcccaagacgccacaggagccgatcccgagaacggcgccaccgctcgcgatcc
aaatctccaggccatcatcggagccacagacacaggagccactcaaagtcgcctgaaagg
tcgaagaaaagccacaagaagagccggcgggggaatgagtag
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integrated database retrieval system
