Monodelphis domestica (gray short-tailed opossum): 100010978
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Entry
100010978 CDS
T01031
Symbol
VCL
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04510
Focal adhesion
mdo04520
Adherens junction
mdo04670
Leukocyte transendothelial migration
mdo04810
Regulation of actin cytoskeleton
mdo04820
Cytoskeleton in muscle cells
mdo05100
Bacterial invasion of epithelial cells
mdo05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100010978 (VCL)
04520 Adherens junction
100010978 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100010978 (VCL)
04810 Regulation of actin cytoskeleton
100010978 (VCL)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100010978 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100010978 (VCL)
09174 Infectious disease: parasitic
05146 Amoebiasis
100010978 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mdo04812
]
100010978 (VCL)
04147 Exosome [BR:
mdo04147
]
100010978 (VCL)
Cytoskeleton proteins [BR:
mdo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100010978 (VCL)
Exosome [BR:
mdo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100010978 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
100010978
NCBI-ProteinID:
XP_001364414
Ensembl:
ENSMODG00000000633
LinkDB
All DBs
Position
1:50774587..50890308
Genome browser
AA seq
1133 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTRNANNQGIEEALKNRNFTVEKMSTE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVAELRARGQGATPMAMQKAQQVSQGL
DMLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
LCDDPKEREDILRSLGEISALTSKLSDLRRQGKGDSPEARALAKQIATALQNLQTKTNRA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKTKMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNRNETFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKPGKEASDTGVGVAGAVVADEAGFPLPSDNEDDYEPELLSVPTNQP
VNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKD
IAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISD
EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgttccacacacgcacgatcgagagcattctggagccggtggcgcagcagatc
tcgcacctggtgataatgcacgaggagggcgaggtggacggcaaagccatcccggacctc
acagctcctgtggccgccgtgcaggcggccgtcagcaacctcgtccgggttggaaaggag
actgtccagaccaccgaggatcagattttgaagagagacatgccgccagcatttattaag
gtcgaaaatgcttgtactaagcttgttcaggcagcccagatgcttcaggcagatccttac
tctgtgccagctcgtgattatctgattgatggctcaaggggtatactttctggaacatct
gacttgctcctcacctttgatgaggctgaggtccgcaaaatcatccgtgtgtgcaaaggc
attttggaatatctaacagtggcagaagtggtagagacaatggaggatttggtcacctac
actaagaatttgggaccaggaatgacgaaaatggccaaaatgattgatgaaaggcaacag
gaattgacccaccaggaacatagagtgatgttggtgaattcaatgaacactgtgaaagag
ttattgccagtcctcatttcagctatgaagatttttgtaactaccagaaatgcaaacaac
caaggtattgaagaagctttgaaaaaccgaaactttacagtggaaaagatgagcacagag
attaatgagatcatccgagtcttacagcttacttcctgggatgaagatgcttgggccagc
aaggacactgaagccatgaagagagctttggcctccattgattctaaactgaaccaggcc
aaaggttggctccgcgatcccagtgcctcgccaggagatgctggagagcaagcaatcagg
cagatcttggatgaagctggaaaagttggtgaactctgtgcagggaaagaacgcagagag
atcctgggaacctgcaaaatgttagggcagatgactgaccaagtggctgaacttcgagcc
agaggacaaggagccactcccatggccatgcagaaagcccagcaggtgtcccagggtcta
gatatgctcactgcaaaggtggaaaatgcagcacgaaaactggaggccatgacaaattca
aaacagagcatcgcaaagaagattgatgctgctcagaattggcttgcagatccaaatggg
ggacctgaaggagaagaacagattcgaggtgctttagccgaagctcggaaaattgcagaa
ttgtgcgatgatcctaaggaaagagaggacattttgcgttcccttggagaaatctctgct
ctgacttctaaattgtcagatctaaggagacaggggaaaggagactctccagaggcccgg
gctttggctaagcaaatcgccacagccctgcagaacctgcagaccaaaaccaacagggct
gtggccaatagcagaccagccaaagcagctgtgcatttggagggcaagattgagcaagct
cagaggtggattgataatcccacagtagatgatcggggtgtaggtcaggctgcaatccgg
ggccttgtggcagaagggcatcgtcttgccaatgttatgatgggtccttatcgccaagat
cttcttgcaaaatgtgaccgagtcgaccagctaacagcccagctcgcagacctggcagct
agaggggaaggagagagtccacaagcaagggctcttgcttcccagctacaggattcctta
aaggatctgaaaacaaagatgcaagaggccatgactcaggaagtgtcagatgtattcagt
gataccaccacacctatcaagctactggcagtggctgctactgcacctcctgatgcgccc
aacaggaatgagacgtttgatgaaagggcagctaactttgaaaaccactctggacggctt
ggtgctactgcagagaaggcagctgctgttggaactgctaataagtcaactgtggaaggt
attcaggcttcagtgaagacagcaagagaactcacgccccaggttgtttcagctgctcgc
atcttactaagaaatcctggaaatcaagctgcttatgaacattttgaaactatgaagaac
caatggattgataacgttgagaaaatgacagggctggtggatgaagccatagacaccaaa
tctctgctggatgcttccgaggaagcgattaagaaagaccttgacaaatgtaaagtagcc
atggctaacatccaaccacagatgcttgttgctggggcaaccagcattgctcggcgagcc
aatcggatcctgttagtcgccaaacgggaggtggaaaactccgaggatcccaaattccgg
gaagctgtgaaggctgcttctgatgaactaagcaaaaccatctccccgatggtgatggat
gcaaaagctgtagctggaaacatttctgatcctggcctgcagaaaagcttcctggattcg
ggatatcggattctgggtgccgtggccaaggtcagagaagccttccaacctcaggagcct
gatttccctcctcctcccccagaccttgaacaacttcggctgacagatgagcttgctcct
cccaaacctcctctgcctgagggtgaggttccaccacccaggccccctccaccggaggag
aaggatgaagagttccctgagcagaaggccggggaggtgattaatcagccaatgatgatg
gctgccagacaactccatgatgaagctagaaaatggtccagcaagccgggcaaagaagcc
tcggacacaggcgtaggtgtcgctggggcggtcgtggctgatgaggcggggtttcctctc
ccctctgacaatgaagacgattatgagcctgagctgctgtcagtgccgaccaatcagccg
gttaaccagcccattctggccgccgctcagtctttacatcgagaagcaaccaagtggtct
agtaagggtaatgacatcattgcagcagccaaacgaatggccctgctgatggctgagatg
tcacggctggtgagaggaggcagtggcaccaaacgggcactgattcagtgtgccaaggac
atcgccaaagcctctgatgaggtgacaaggctggccaaggaggtggcgaagcagtgtacc
gacaagcgcatccgaaccaatctcttacaggtgtgtgagcgaattccaaccattagtacc
cagctcaaaatcctgtccacggtcaaagccaccatgctgggccgaaccaatatcagtgat
gaggaatcggagcaggccacagaaatgctggttcataatgcccagaacctcatgcagtct
gtgaaggagaccgttcgagaagcagaagcagcatcaattaagattcgaacagatgctggt
ttcactttgcgttgggttcggaagactccctggtaccagtag
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