Monodelphis domestica (gray short-tailed opossum): 100011043
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Entry
100011043 CDS
T01031
Symbol
IFT140
Name
(RefSeq) intraflagellar transport 140
KO
K19672
intraflagellar transport protein 140
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mdo03037
]
100011043 (IFT140)
Cilium and associated proteins [BR:
mdo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
100011043 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_Prp19
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
TPR_IFT80_172
WDR55
TPR_GEMI5
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Clathrin
TPR_COPA_B
Beta-prop_WDR75_1st
tRNA_int_end_N2
WD40_MABP1-WDR62_1st
TPR_12
RNase_HII
Motif
Other DBs
NCBI-GeneID:
100011043
NCBI-ProteinID:
XP_001364681
Ensembl:
ENSMODG00000016160
LinkDB
All DBs
Position
6:complement(155927904..156159388)
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AA seq
1464 aa
AA seq
DB search
MALYFDHRIEAPDSAGSPSHITWHPLHPLLAVASVSITSGGSVDVYLEQGEHVPETHIER
SFRAMSLSWHPTRMILAIGWETGEVLVFNKQDKEQHPVPPTHTADITVLTWSTNGNCLVS
GDRVGVLVLWRLDQRGRVQGTPLLKHEYGKHLTHCIFRLPPPGEDLVQLAKAAVSGDEKA
LDMFNWRKSGFGGFLKMGSQEGLSFFVSLVDGTVHYVDEKGKTSRVVSVDSPIQMMFYIE
KREVLVVVTENLLLSLYTVTPEGDAEEILKVKLSGKTGHSADIILIEGSLLVTAIGETVL
RLWDLERGENYVLSPEEKFGFETGMNINCVSYCKAKGILAAGTNKGQVAMWKKVPVSSQS
TLILEGKDKWTLQTPTELEGNITQIKWGSRKNLLAVNNISSVIILSEQAMSSHFHQQVAV
VQVSPNLLNVTFFFTGMTFSLRTEMHISGAFATKDAVAVWNGKQVAIFEPSGASLRNAGS
FPCESPVLAMHEENVYTVEPNRVQVRTWQGTVKQLLMFSETEGNPCSLDVCGNFLVVGTD
LAHFKSFDLSRREAKVHCNCKNLAELIPGIGGISSIKCNSNGNKISILLHKPDNSLDSKI
CFYDVEMDTATVFDFKTGQADGKETFSFIGEENKKNPIFGDLSLLDHVPISHFWDQSEPR
LFVCEAVHDVIIVHPQSAEKKQPSSENSGSTADVLIISFFSTEEHGLLLQDSFPRPSAFQ
ALLGIEVPHYYFTKKPGETDKEDQMDSVSHRIPQMVGKKPLRDFIGLEECDKTTREAMLN
FSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNMGHARGAKALRE
AEQEPEVEARVAVLAIQLGMLEDAEHLYKKCKRYDLLNKFYQASDQWQKAVEIAETHDRV
HLRTTYYNYAKHLEATANCNLALNYYEKSDTHRFEVPRMLSEDLQSLEIYINKMKDKSLW
KWWAQYLESQADMDSALRYYELAQDYFSLVRIYCFQGNIQKAAEIANETGNWAASYHLAR
QYESQEEIKQAVHFYTRAQAFNNAIRLCKENNLDDQLMNLALLSSPEDMIEAARYYEEKG
EQMDRAVMLYHKAGHFSKALELAFATQQFVALQLIAEDLDEKSDPALLARCSDFFIEHSQ
YEKAVELLLAAKKYHDALQLCLEQNMIITEEMAEKMTVSKESKDLSEESRRELLEQIANC
CMRQGNYHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLD
WRKEPEIMKNIISFYTKGRALDLLAGFYDACAQVEIDEYQNYDKAHGALTEAYKCLSKAK
PKSPMEQETKLAQLQSKMTLVKRFIQARRTYTEDPKESVKQCELLLEEPDLDSTIRIGDV
YGFLVEHYLQMEEYQMAYKYLEEIRKRLPSANLTYYVNQRTMDAVHRGLGIPLSRIMPER
IRHNSMEDGKEVDEEVIEEVEDDT
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggcactctactttgatcaccgaatagaagcccctgattctgctgggtctccttcccat
attacttggcatcctcttcatcctttgttggcagttgcttctgtcagcataacttctgga
ggaagtgtagatgtgtacctcgaacagggtgagcacgtgcctgaaacacacattgagaga
tcattccgagctatgtccctgagctggcacccaactcgaatgatcctggctattggctgg
gaaactggagaagtcttagtatttaacaagcaggataaagaacaacacccagtccccccg
acccatactgctgatattacagtcctgacctggagcacaaatggaaattgcctcgtgtca
ggggatagggttggtgttctggtgttatggcggttagaccaaagaggcagagtacaagga
acacccttattgaaacatgaatatggaaagcatttgacccattgcatctttcggcttccc
cctcctggggaggacttggttcaattggcaaaagcagctgtaagcggtgatgaaaaagca
ctggacatgtttaattggagaaaaagtggctttggaggtttcctaaaaatgggatcccag
gaaggattgtccttctttgtcagcttggttgatggaacagtacactatgtggatgaaaaa
gggaagacttcccgtgttgtgtctgtagacagtccaatccaaatgatgttttacatcgag
aagagagaggtcttggtggtggtgacagagaatcttctcttgtcactttatacagtcact
cctgagggtgatgctgaggagatcttgaaggtcaaactgagtggaaaaacaggtcactct
gcagacatcattttgattgaaggtagtcttcttgttacagcaattggggaaacagtcctc
agattatgggacttggaacgaggagagaattatgtgcttagtccagaggagaagtttggt
tttgagactggtatgaacataaactgtgtctcttactgcaaggctaaaggtattctggca
gctggtaccaataaaggacaagtcgctatgtggaaaaaggtaccagtgagcagccagagc
actctgatcctagaaggcaaggacaagtggactctgcaaaccccaactgagctggagggg
aatatcactcagataaagtggggctctaggaagaaccttctggcagtgaacaacatcagt
tctgtgatcatcctcagtgaacaggcgatgtcatcacatttccaccagcaggtggcagtg
gttcaggtgtcaccaaatctgctgaatgtgaccttcttcttcactggaatgacattcagc
ctgcgcacagagatgcacatcagtggggcttttgccaccaaggatgctgttgcagtctgg
aatgggaagcaagtagctatctttgagccctctggagcctcattacgaaatgcaggttcc
ttcccatgtgagtctcctgtgttggcaatgcatgaagaaaatgtttatactgtggagcca
aaccgggttcaagttcgcacttggcagggaactgtcaaacagctgctaatgttttcagaa
acagagggaaatccatgctctttggacgtctgtgggaatttcctggttgtaggaacagac
ttggctcactttaaaagttttgatctctcccgaagagaggccaaagtgcattgcaactgc
aagaacctggcggagttaattccaggcataggtggcatttcttccatcaaatgtaactcc
aacggtaacaaaatcagcatcctccttcacaagcctgacaatagtcttgattccaaaata
tgcttctatgatgttgaaatggacacagccactgtcttcgacttcaagactggacaagct
gatggaaaagagaccttctctttcataggggaggagaataaaaaaaatcctatttttggg
gatctgagtctacttgatcatgttccaatcagccacttctgggatcagagtgagcccagg
ctttttgtatgtgaagcagtccatgatgttattatagtccatccgcaatctgctgaaaag
aaacagccatcctcagaaaattctggcagcacggcagatgttttgattatatcattcttc
agcactgaagaacatggcctcttgcttcaggacagttttccacggccttccgccttccag
gctcttctgggtattgaagtgccacattattacttcacaaaaaaaccaggcgaaacagat
aaagaagatcaaatggattctgtatctcatcgaatccctcaaatggtaggcaagaaaccc
ctacgagatttcattgggctagaagaatgtgataagactacccgagaagccatgctaaat
tttagcttttttgtcaccattggagatatggatgaagctttcaaatccatcaagctcatc
aaaagtgaagctgtctgggagaacatggcccgcatgtgtgtgaaaacacagcggctggat
gtggccaaggtgtgccttgggaacatgggccatgcccgaggagccaaagccctacgagag
gcagagcaggaaccggaggtggaagcacgagtggctgtcctggcaattcagctaggcatg
ctggaggatgcagagcacctgtacaaaaaatgtaaacgctatgacttactgaacaaattc
taccaggcatcagaccagtggcagaaagctgtggaaatagctgagacccatgaccgagtt
caccttcgtaccacctactacaactatgctaagcacttggaggccacagcaaattgcaac
ctggcactgaattactatgagaagtcagacacacataggtttgaggtgccacggatgctg
tcagaagatctgcagtctttggagatttacatcaataaaatgaaagataagagcctgtgg
aagtggtgggcccagtacttagaaagccaggcagacatggactcagcgctacggtactat
gaattggctcaggattatttctctcttgtccgcatttactgcttccaaggcaacattcag
aaggctgccgaaatagccaatgaaacggggaactgggccgcatcctatcatctggctcgg
cagtatgaaagccaggaggaaatcaaacaggccgtgcacttctacaccagggcccaggcc
tttaataatgccatccgtttatgtaaggagaacaatttagatgaccagctgatgaatttg
gctttgttgagttccccagaagacatgattgaggcagcacggtattatgaggagaaggga
gaacaaatggaccgagcagtcatgctgtatcacaaggctggccacttctccaaggctttg
gaattggcatttgccacccagcaatttgtggctctgcagctgattgctgaggatttggat
gagaagtcagacccagccctcctggctcgctgctctgatttttttattgagcacagtcag
tatgagaaggccgtggaacttctgctggcagccaagaagtaccatgatgcccttcagctt
tgcctagagcaaaacatgatcatcactgaggagatggcagaaaagatgacagtctctaaa
gaatcaaaggatctttctgaggagtcacgtcgggagctactggagcagattgcaaactgc
tgcatgcggcaaggcaactaccacttagctaccaagaaatacactcaagcagggaataaa
ctgaaggccatgagagccctgctgaagtcaggggacacggagaaaattgtattttttgcg
ggcgtctctaggcagaaagaaatttacatcatggccgccaactacttgcagtctctggac
tggcgcaaagaaccagagattatgaagaacatcatcagcttctacaccaaagggagggcc
ctggaccttttggctggcttttatgatgcctgtgcccaggtggagatcgatgaataccaa
aactacgacaaagcccacggagcactgactgaggcctacaagtgcctttcaaaggccaaa
ccgaagagccccatggaacaagagaccaaactcgcacagctccagagtaagatgacgctc
gtgaagagattcatccaagcccgaaggacttacacagaagacccaaaagagtcagttaag
caatgtgagcttctcctagaagaaccagatctggacagtacaatccggataggggatgtc
tacggattccttgttgaacattacttgcaaatggaggaataccaaatggcctacaaatac
cttgaagagatccggaagaggcttccatctgcaaacctgacttactacgtgaaccagagg
accatggatgcagtgcaccgaggactgggcatcccactgagtcgcatcatgcctgagcga
atccgccataatagcatggaagatggcaaggaggtagatgaggaagtgatagaagaagtg
gaagatgacacctga
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integrated database retrieval system
