Monodelphis domestica (gray short-tailed opossum): 100011144
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Entry
100011144 CDS
T01031
Symbol
SMARCA4
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03082
ATP-dependent chromatin remodeling
mdo04714
Thermogenesis
mdo05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100011144 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100011144 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100011144 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100011144 (SMARCA4)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100011144 (SMARCA4)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100011144 (SMARCA4)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100011144 (SMARCA4)
Chromatin remodeling factors
BAF complex
100011144 (SMARCA4)
PBAF complex
100011144 (SMARCA4)
GBAF(ncBAF) complex
100011144 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
100011144
NCBI-ProteinID:
XP_001362962
Ensembl:
ENSMODG00000006287
LinkDB
All DBs
Position
3:complement(430015394..430126003)
Genome browser
AA seq
1612 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPPQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHTGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSAPQMSSGPGGVPLDGSDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGPGQGPGPGPGP
GPGPAPPNYNRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPTLPVDEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVS
QALARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEM
GLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR
RAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHY
VAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEET
ILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDG
SEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGK
FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT
FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV
LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEED
EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEV
ERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRK
RDSDAGSSTPTTSTRSRDKDDDSKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKD
SSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQ
NAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVK
VKIKLGRKEKAQDRLKGRRRTSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgtctactccagatccacccctgggaggaacacctcggccaggaccctctcctgggcct
ggcccatcccctggtgctatgctgggccctagtcctggaccctcacctggttctgcacac
agcatgatgggccccagccctgggccaccttcggcaggacatcccatacctcctcagggt
cctggaggctatcctcaagataacatgcatcaaatgcataagccaatggagtccatgcat
gagaagggaatgtcggatgatcctcgatataaccagatgaaagggatgggaatgaggtct
gggggacatacagggatggggcctcctccaagtccaatggatcagcattctcaaggttat
ccctctcctctgggtggctctgaacatgcctcaagtcctgttccagctaatggcccatct
tcagccccacagatgtcatctggtcctggtggggtaccactagatggtagtgacccacaa
gcattaggacaacagaatcgtggcccaacgccttttaatcaaaaccagctgcatcaactc
agagctcaaattatggcttataaaatgctggccagaggacagcctctaccagatcacctg
caaatggcagtgcaggggaaaagaccaatgccaggaatgcagcagcaaatgccgacacta
cctccaccctctgtatctgggacaggaccaggacaaggaccaggccctggacctgggcct
ggtccaggacccgcacctccaaattataacagacctcatggtatgggagggccgaatatg
ccccctcctggaccctcaggagttcccccaggaatgcctggacagcctcctggtggaccc
ccaaagccctggcctgaaggacccatggcaaatgctgcagcccccactagcacacctcag
aaactgattcctccccagccaactgggcgtccttcaccagcaccccctgcagtacctcct
gcagcttctcctgtaatgcctccacaaacacagtcccctgggcagccagcccagcctgcc
cctatggttcagctccatcagaaacagaatcgaatcactcctatccagaagccaagagga
cttgatccagtagaaattttgcaggagagagagtataggttacaggcccggattgcccac
cgaattcaggaacttgaaaaccttcctgggtccctggctggagacttaagaacaaaagca
accattgaactcaaagcactcagactgctaaactttcagagacagctacgtcaggaagtt
gtggtatgcatgagaagagacacagccctggaaactgcactgaatgccaaggcttacaaa
cgtagtaagcgacagtcccttcgtgaggctagaataacagagaaactggagaagcagcaa
aagattgaacaagagcggaaacgcaggcaaaagcaccaggaatacctcaatagcattctt
caacatgccaaggattttaaagaatatcatcgatctgtcactggcaaaatccaaaaactt
acaaaagcagtggctacataccatgccaatactgagcgggagcagaagaaagagaatgag
cggattgagaaggagaggatgagaagactgatggctgaagatgaagaaggatataggaag
ctaattgaccagaagaaagataagcgccttgcatacttacttcagcaaacagatgaatat
gtggctaacctgacagaactggtccgacaacacaaggctgcacaggttgctaaggaaaaa
aagaagaaaaagaaaaagaagaaggcagagaatgcagaagggcagacacctgcaattgga
ccagatggagagcctttggatgaaaccagtcagatgagtgatctccctgtgaaagtgatc
catgtagaaagtgggaaaatcctcactggcacagatgcccccaaagcaggacaattagag
gcatggcttgaaatgaatccagggtatgaagtagctccaagatctgacagtgaagagagt
ggctcagaagaggaggaggaggaagaggaggaagagcagccacaaccagcgcagcccacc
cttcctgtggatgaaaagaaaaagatcccagatccagacagtgatgatgtctctgaagtg
gatgcaagacatattattgagaacgccaagcaagatgttgatgatgagtatggtgtttcc
caggctcttgctcgtggtctgcagtcatattatgcagtggcccatgcagtcactgaaagg
gtggacaaacagtctacacttatggtcaatggggtacttaaacaatatcagattaagggt
ttggagtggctggtgtccctatataataataatctgaatgggatcctggcagatgaaatg
ggcctcggcaaaactatccagacaattgctttaattacatacctcatggaacacaagcgt
atcaacggaccatttctcatcatagtacctctttcaactctgtcaaattgggcatatgaa
tttgataagtgggctccttctgtggtgaaggtctcctacaagggctctccagcagcaaga
agagcttttgtacctcagcttcggagtggaaaattcaatgtcttgctaactacgtatgaa
tatattataaaagataagcacattcttgccaagattcgttggaagtacatgattgtagat
gaaggtcacaggatgaagaatcaccattgtaagctaacacaggtcctaaacacacactat
gtagctccccgccgcctgctgttgacggggacgcctctgcagaacaagctgcccgagctg
tgggcactgctcaacttcctcctccctaccatttttaagagctgcagcacctttgagcag
tggttcaatgctccctttgccatgacaggagagaaggtagacctgaatgaagaagaaact
attcttattatccggcgtttacacaaagtgctacgtcctttcctgctcagacggttaaag
aaagaagttgaagcccagttacctgaaaaggtagagtatgtgatcaagtgtgatatgtct
gcactgcagcgagtcctctatcggcacatgcaagccaagggtgtgctcctgacggatggc
tcagagaaggacaagaagggcaagggtggcaccaagaccctgatgaacaccatcatgcag
ctaagaaagatctgtaaccatccttacatgttccagcacatagaggagtcattttctgag
cacttgggatttactggaggcattgtccaaggccttgatttataccgagcctctggaaaa
tttgaactcctagatcgaattcttcccaagctccgagcaaccaaccataaagtgctactc
ttttgccaaatgacctccctcatgaccattatggaagattattttgcatatcgtggtttt
aaatacctcagacttgatggaaccacaaaagctgaagatcgtggtatgttgttgaaaact
ttcaatgaaccaggctctgagtatttcatttttctcctgagcactcgggccgggggtctt
gggctgaacctccagtctgcagatactgtgataatttttgacagtgactggaatcctcac
caggacctgcaagcacaggaccgtgcccatcgaattgggcagcagaatgaagttcgagtc
ctccgtctttgcacagtcaatagtgtggaagagaaaatcttggctgcagccaaatacaag
ctaaatgttgatcagaaagtgatccaggctggtatgtttgaccagaaatcctccagccat
gagagaagagctttcctccaggcaatcctagagcatgaggaacaggatgaggaagaagat
gaagttccagatgatgaaaccgttaatcagatgattgcccgacatgaggaggaatttgat
cttttcatgcgcatggatttggaccgtaggcgagaggaagctcgaaaccccaaaagaaaa
ccacgcctgatggaagaagatgagcttccatcttggatcattaaagatgatgctgaagtt
gagaggctgacctgtgaggaggaggaagaaaagatgtttggacgcggctcccgccaccgg
aaagaagtcgactacagcgactcactgaccgagaagcagtggctcaaggccatagaggaa
ggtacactggaggaaatcgaggaagaagtccggcagaagaagtcatctcggaaacgcaaa
cgggacagtgatgctggctcttcaacaccaacaaccagcactcgaagccgtgacaaggat
gatgatagcaaaaagcaaaagaaacgtggcagaccccctgctgaaaagctctccccaaac
ccaccaaacctcaccaagaaaatgaagaagattgtggatgctgtgatcaaatacaaagac
agtagtagtggacgccagctgagcgaggtgttcattcagcttccttccagaaaagagcta
ccagagtactacgagctcatccgaaaacctgtggacttcaagaaaataaaggaacgaatc
cggaaccacaagtaccggagccttaacgacctagagaaggatgtgatgttgctgtgtcag
aatgctcagaccttcaacctggaaggctcgctgatctatgaagactcaatcgtcctacaa
tctgttttcaccagtgtgagacagaaaattgaaaaagaggatgatagtgaaggagaagaa
agtgaagaggaggaggaaggagaagaggaaggatccgaatctgagtctcgctctgtcaaa
gtgaagattaagcttggccgaaaagagaaagcacaagatcggttaaagggtcggagacgc
accagtcggggatcccgagccaaaccagtagtgagtgatgatgacagtgaagaagaacag
gaagaggatcgctcaggaagtggcagtgaagaagactaa
DBGET
integrated database retrieval system
