Monodelphis domestica (gray short-tailed opossum): 100011218
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Entry
100011218 CDS
T01031
Symbol
DHX15
Name
(RefSeq) DEAH-box helicase 15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100011218 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdo03041
]
100011218 (DHX15)
03009 Ribosome biogenesis [BR:
mdo03009
]
100011218 (DHX15)
Enzymes [BR:
mdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100011218 (DHX15)
Spliceosome [BR:
mdo03041
]
Complex A
U2 snRNP components
U2 related factors
100011218 (DHX15)
Complex B
100011218 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100011218 (DHX15)
Ribosome biogenesis [BR:
mdo03009
]
Eukaryotic type
90S particles
Helicases
100011218 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
100011218
NCBI-ProteinID:
XP_001362629
Ensembl:
ENSMODG00000000516
UniProt:
F6Y5H8
LinkDB
All DBs
Position
5:203905883..203983630
Genome browser
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRERDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSTHSTHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcaccggttggacctaggggaggattatccctccggcaagaaacgtgca
gggaccgatgggaaggatcgagaacgtgaccgggatcgtgaagatcgttccaaagatcga
gacagagaacgggacaggggagatagagagcgagaaagagagaaggagaaggaaaaggaa
ttacgtgcctctactaatgctatgctcattagtgctggattaccacctttaaaagcatcg
cattcagcacactcgacacattcaacacattcaacacattcaacacattctgctcattca
acacacacaggacatgcaggacacacatcacttccacagtgtatcaatccattcactaat
ctaccccacacccctcgttactatgacattctaaagaagcggcttcaactccctgtttgg
gaatataaggataggtttacagatattctggttaggcatcagtccttcgtactagttggt
gagaccggttctggtaaaacaacacagattccccagtggtgtgttgagtacatgcgctcc
ttaccaggacctaagagaggagtggcttgcacgcagcccagaagagtcgctgcaatgagt
gtggctcagagagttgctgatgaaatggatgtgatgttaggtcaagaagttgggtactcc
attcgatttgaagactgcagtagtgcaaaaactattctcaaatatatgacagatggaatg
ttgcttcgagaagctatgaatgatccccttctagagcgctatggtgttataatccttgat
gaagctcatgaaaggactttggccacagatattctaatgggagttttgaaggaagttgtg
aggcaaagatcagatttaaaggttattgttatgagtgctactttagatgcggggaaattt
cagatctactttgataattgtccccttttaactatccctggccgtacacacccagttgag
attttttatactccagaaccagagagagattaccttgaagcagccattcgaactgtgata
caaattcacatgtgtgaagaggaggaaggagacctccttcttttccttactggacaagag
gaaattgatgaagcctgtaagagaataaagcgtgaagttgatgatttaggtccagaggtt
ggtgacattaaaatcattcctttatattccacgcttccacctcaacaacaacagagaatt
tttgaacctcctcctccaaaaaaacagaatggagcaataggacgaaaggtagttgtatct
accaatattgcagagacatcactaacaatagatggtgttgtatttgtcattgaccctgga
tttgcgaaacaaaaggtatataatcctcgaatcagagtggagtctcttctggtgacagca
atcagtaaagcttctgcccagcagagagctggacgagctggtcgtaccaggcctggaaaa
tgttttaggctttatacagagaaagcctataaaactgaaatgcaggacaatacttaccct
gaaattttgcggtctaatttgggttcggtggtgttgcagttgaagaaacttggtatagat
gatttggtacacttcgattttatggatccaccagctcctgaaactctgatgagagcccta
gagcttttgaattatcttgctgctttaaatgacgatggagacttgactgaattgggatcc
atgatggcagaatttccattggatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagcagcagatgaagccaagatgaggtttgcccacata
gatggagatcatctgacactgctgaacgtttaccacgcttttaaacaaaatcatgagtcg
gttcagtggtgttatgacaacttcattaactacaggtccctgatgtctgcagacaatgta
cgccagcagctgtcgagaatcatggacagatttaatttgcctcgtagaagtacagacttc
acaagcagagactattacattaatataagaaaagctttggttactgggtattttatgcag
gtggcacatttggaacgaacggggcattacttaactgtaaaggacaaccaagtagtgcag
ttacatccttcaactgttctggaccacaagccagaatgggtgctttacaatgaatttgtc
cttacaacgaagaattacatccggacatgtacagacatcaaaccagaatggttggtgaaa
attgcccctcaatattatgatatgagcaattttccacagtgtgaagcaaagagacaattg
gaccgcatcattgccaaacttcagtccaaggaatattcacagtactga
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integrated database retrieval system
