Monodelphis domestica (gray short-tailed opossum): 100011241
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Entry
100011241 CDS
T01031
Symbol
RAG1
Name
(RefSeq) recombination activating 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04068
FoxO signaling pathway
mdo05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
100011241 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
100011241 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdo04121
]
100011241 (RAG1)
Enzymes [BR:
mdo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100011241 (RAG1)
Ubiquitin system [BR:
mdo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100011241 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
100011241
NCBI-ProteinID:
XP_007497394
Ensembl:
ENSMODG00000024470
UniProt:
Q28463
LinkDB
All DBs
Position
5:272748548..272759742
Genome browser
AA seq
1047 aa
AA seq
DB search
MEISVAPSQGLRPVPDEIQYPHMKFSEWKFKLFKVRSSVKPSPGEAQGPSKNTMEGQSSL
EETPVVICNTNIPAPEKPALVQPTFTANSKSLEKPADIGKAGEKAIHQASLRQLCRICGA
SFRADGQNRRYPVHGPVDSKTQGILRKKEKKVTSWPDLIAKVFKIDVKGDNDSIHPTQFC
HNCWNIMYGRFSNSPHEVYFPRNATIEWHPHTPSCDICQAARWGLKRKGRQSNPSLSKKL
KAMADRARRARLPKSQAQPRKSSKDLMKKLTNCSKMHLSTKCLAVDYPVDFVKAISCQIC
EHILTDPVETTCKHLFCRTCILRCLKVMGSYCPSCQYPCFSTDVESPPRSFVNTLNSLVV
RCPVKDCDKDVSLEKYNQHISSHKEPKESYVYINKGGRPRQHLLSLTRRAQKHRLRELKL
QVKAFADKEEGGDLKAVCLTLFLLVLRARNEHRQADELEAIMQGRGSGLQAAVCLAIRVN
TFLSCSQYHKMYRTVKAITGRQIFQPLHALRNAEKTLLPGHHPFEWKPTLKNVSARTDVG
IMDGLSGLSASVDDYPVDTIAKRFRYDVALVSALMDMEEDILEGMKSKDLSDYLNGPFTV
VVKESCDGMGDVSEKHGSGPAVPEKAVRFSFTIMNISIAQGQESVRIFEEAKPNSELCCK
PLCLMLADESDHETLTAILSPLIAEREAMKSSELLLEMGGIQRTFKFIFRGTGYDEKLVR
EVEGLEASGSVYICTLCDATRLEASQNLVFHSITRSHAENLERYEVWRSNPYQESAEELR
DRVKGVSAKPFIETVPSIDALHCDIGNAAEFYKLFQMEIGEVYKNPNASKEERKRWQATL
DKHLRKKMNLKPIMRMNGNFARRLMTKETVEAVCELIHCEERHEALRELMDLYLKMKPVW
RSTCPAKECPESLCQYSFNSQRFAELLSTKFQYRYEGKITNYFHKTLAHVPEIIERDGSI
GAWASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKNSG
LIINPQADFEDSLGLDDSQEILDSMEF
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatctgtggcaccgagtcaaggacttcgcccagtaccagatgaaatccagtac
ccacacatgaaattttctgaatggaaatttaagctcttcaaagtgagatcctctgtgaag
ccctcaccaggagaagctcaggggccatctaagaacacaatggaaggacaatcttctttg
gaggaaactccagtcgtcatatgcaacaccaatattccagcaccagaaaagccagccctg
gtccagccaacattcacagccaattccaagtctttggagaagcctgctgatattgggaag
gccggggagaaggcaatccaccaggccagtcttcggcagctttgccgaatctgtggtgct
tcctttagagctgatggacagaataggagataccccgtccatggtccagtggacagtaaa
actcagggcatcctccgaaagaaggaaaagaaagttacctcctggccagacctgattgcg
aaggtttttaaaattgatgtgaaaggggataatgactccatccatcccacccagttttgt
cacaactgttggaatatcatgtatgggaggttcagcaattccccacatgaggtatacttc
ccgaggaacgctaccatagaatggcacccacacacgccatcctgtgacatctgccaggca
gcccgctggggactcaagaggaaaggccgccagtccaacccatcgctcagcaaaaagctc
aaggccatggctgacagagctcgaagggctcgcctccccaagagtcaagcccagcctcga
aaaagcagcaaggacctgatgaaaaagctaaccaactgtagcaagatgcacctgagcact
aagtgccttgctgtggactaccctgtggactttgtgaaggccatctcatgccagatctgt
gagcacattttgactgaccccgtggaaaccacctgcaaacatttattctgtagaacctgc
attttgaggtgcctcaaggttatgggcagctattgcccctcttgccaatatccctgcttt
tctacagatgtggaaagcccaccgaggtcctttgtgaacaccctcaattccctggtggtg
cgatgccctgtgaaagactgcgacaaggatgtcagccttgaaaaatataaccagcacatc
tcaagccacaaggaacccaaagagtcctatgtgtatatcaataaaggtggccgaccccgg
cagcatcttctgtccctgacccggagggcgcagaaacaccgtctaagagaactgaagctg
caggtcaaggcttttgcagataaagaagaaggaggtgatctgaaggcagtgtgcttgact
ttgttcctgctggtgctgagagctaggaatgagcatcggcaagcagatgagctcgaggcc
atcatgcagggcagaggatcaggcctccaggcagctgtgtgcttggccatccgggtcaac
acttttctgagctgcagccagtaccacaagatgtaccggacggtcaaagccatcactggg
aggcagatcttccaacccttacatgcccttcgaaacgcggagaagactcttctgcctggg
catcacccctttgagtggaagccaactctgaagaatgtctctgctcgcacagacgtaggc
atcatggatggactttctgggttgtctgcttcggtggatgactacccagttgacaccatc
gcaaagaggttccgttacgatgttgccttggtatctgccttgatggacatggaagaagac
atcctagaaggcatgaaatccaaagacttgagtgattacctgaatggtcctttcaccgtg
gtagtgaaagagtcctgtgatgggatgggagatgtgagtgagaagcatgggagtgggcca
gctgtacccgagaaggctgttcgcttttcgttcaccatcatgaatatcagcatcgctcag
ggtcaagagagtgtgaggatatttgaagaagccaagcccaactcggagctgtgttgtaag
cccttgtgcctcatgctggcggatgaatctgaccacgagaccctgacagccatcctgagt
cccctcattgcagagagagaagcgatgaagagcagtgaattactgcttgagatgggaggc
atccaaagaacttttaagttcatcttcaggggaactggctacgatgaaaaacttgtccgg
gaagttgaaggtcttgaggcttctggctctgtctacatttgtaccctctgtgatgccacc
agactggaagcttcccaaaatcttgtttttcactccatcactagaagtcatgctgagaat
ctggagcggtatgaagtctggagatccaacccctaccaagagtcagcagaagagctgagg
gacagggtgaaaggggtctcagcaaagcccttcatcgagacagttccctccatcgatgct
ctccactgtgatattggcaatgcagccgagttttataagctcttccagatggagattggg
gaagtttataagaatcccaatgcatccaaagaggagaggaaacgatggcaggctaccctg
gataagcacctccggaagaaaatgaacttgaaacccataatgaggatgaatggcaacttt
gccaggaggctcatgaccaaggagactgtggaagcggtatgtgaattaattcactgtgag
gagaggcatgaggctttgagagagctcatggacctttacttgaagatgaagcctgtgtgg
cgctcaacctgccctgccaaagagtgtccagaatcactttgccagtatagtttcaattca
cagcgttttgcagaactcctctctaccaagttccagtacagatatgaaggcaaaatcact
aattactttcataagaccctggcccatgtccctgagatcattgagagagatggctccatt
ggagcatgggctagtgaagggaatgaatctggtaataaactcttccgacgcttccggaaa
atgaatgctaggcagtctaagtgctatgagatggaggatgtcctgaaacaccattggttg
tatacctccaaatatcttcagaagttcatgaatgctcataatgccttgaaaaattctggg
ctaatcattaacccacaagcagactttgaagactccctagggctagacgactcacaggaa
attcttgattcgatggaattctaa
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