KEGG T01031: 100011271

Monodelphis domestica (gray short-tailed opossum): 100011271

Entry

100011271         CDS       T01031

Symbol

RAB39B

Name

(RefSeq) RAB39B, member RAS oncogene family

K07925

Ras-related protein Rab-39B

Organism

mdo Monodelphis domestica (gray short-tailed opossum)

Pathway

mdo04140

Autophagy - animal

mdo05014

Amyotrophic lateral sclerosis

mdo05022

Pathways of neurodegeneration - multiple diseases

Brite

KEGG Orthology (KO) [BR:mdo00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100011271 (RAB39B)
09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100011271 (RAB39B)
   05022 Pathways of neurodegeneration - multiple diseases
    100011271 (RAB39B)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdo04131]
    100011271 (RAB39B)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:mdo04031]
    100011271 (RAB39B)
Membrane trafficking [BR:mdo04131]
Autophagy
  Other autophagy associated proteins
   Rab GTPases
    100011271 (RAB39B)
GTP-binding proteins [BR:mdo04031]
Small (monomeric) G-proteins
  Rab Family
   Rab39/42 [OT]
    100011271 (RAB39B)

SSDB

Motif

Pfam:

Ras Roc Arf MMR_HSR1 RsgA_GTPase Gtr1_RagA GTP_EFTU TniB AAA_22

Other DBs

NCBI-GeneID:

100011271

NCBI-ProteinID:

XP_016282729

UniProt:

H9H6X0

LinkDB

Position

AA seq 213 aa
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFPQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL
VGHKCDLDTQRQVTRHEAEKVAAGYGMKYIETSARDAINVEKAFTDLTREIYELVKRGEI
TIQEGWEGVKSGFVPNVVHSSEEVVKSDRRCLC

NT seq 642 nt +upstreamnt +downstreamnt
atggaagccatctggctctaccagttccggctgatcgtgatcggggactccacggtggga
aagtcgtgcctcatccgccgcttcaccgaggggcgcttcccgcaggtctctgaccccacc
gtgggggtggatttcttctcccggctggtggaaatcgagcctggaaagcggatcaagctg
cagatctgggacaccgcgggccaggagaggttcaggtcaatcaccagagcctactacagg
aactcggtaggcggtctcctcttatttgacatcaccaatcgcaggtccttccagaatgtc
cacgagtggttagaggagaccaaagtccatgtccagccataccagatcgtgtttgttctg
gtgggtcacaagtgtgacctggacacccaacgacaagtgacccgacatgaggcagagaaa
gttgctgctgggtacggtatgaagtacattgagacatcagcccgcgacgccattaatgtg
gagaaagccttcacagacctgactagagaaatctatgagctggtcaaaaggggggagatt
accatccaggagggctgggaaggggtaaagagtggcttcgtgccaaatgtggttcactcc
tcagaagaggttgtcaaatccgataggagatgcctgtgttag

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