Monodelphis domestica (gray short-tailed opossum): 100011359
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Entry
100011359 CDS
T01031
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM-type containing 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdo04121
]
100011359 (ZSWIM8)
Ubiquitin system [BR:
mdo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
100011359 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
100011359
NCBI-ProteinID:
XP_007478460
Ensembl:
ENSMODG00000000396
UniProt:
F6RP28
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All DBs
Position
1:50516521..50533447
Genome browser
AA seq
1833 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGGGGRSRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIR
LYSCLANGSADEFQRGEQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRC
RVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLIS
ELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSENIKKT
LHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKRR
DSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQTEVAAHACASMCD
EMVTLWRLAVLDPSISPQRRRDLCAQLRQWHLKVIENVKRGQHKKALERLFPGFRPAVEA
CDFSWEEAYPLPGVTYSGSDRKLALCWSRTLPPRSGPPRSGGPDEAGDQPRPPPPDPSVR
PKEPGAKRKGSGEGVPQSQRGPRRPSAEGGDKSSHKQGLGGGKAKLQGGGCGGKGPVSGG
GKRRLSSEDSSLEPDLAEMSLDDGSSLALGAEASTFGGFPESPPHGLAPTTPLSPPTFHS
EPPDAYEEDGGVYFSEGPEPPVAPSSLPGLLPGEGTTQDDLPSTDESGGCPPKPKDMAPG
AGEEDDDYQVYYLNAQDGTGGEEEKPEVGAGEEQDLFAGLKPLKQESRMEVLFACAEALH
AHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAFLL
TVLGERPEHHNLAFRIGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGVNEMST
MRCRAEELREGTLCDYRPVLPLILASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELG
FEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRES
QTHKPQTLSSFYSSSRPATSSQRSPSKHGAPAAGGALQPLPPGSAGGAQPGAVAGVNPDP
AEGFTEKTVAESSPRSPCEGPPPEAAVAPKPEGKVPSRLALGSRGGYNGRGWGSPGRPKK
KHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSSS
GSRRASASGGARAKTAEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNS
STSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAM
EIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNE
IQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTVGGSATPRE
GATGCSASGARASGEAGRALPEGRGGPGTEAVTVSAAAVTAAATVVPVISVGSSLYPGPG
LGHGHSTGLHPYTTLQPHLPCNPQYLTHPGHPLPHMPRPAVFPVPSSAYPQGVHHAFLGP
QYPYSVTPSSLAATAVSFPVPSMAPITVHPYHTESGLPLPTMNNVHTPSSIHQSSSYPAI
QGNSMSTISTQSSSLVSGSFPPPEEETHSQPVGTQSLHHLHAAYRVGMLALEMLGRRAHN
DHPNNFSRSPPYTEDVKWLLGLAAKLGVNYVHQFCMGAAKGVLSPFVLQEIVTETLQRLN
PAHAHTHLRTPAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNTIRGARSAFCLTPMG
MMQFNDILQNLKRSKQTKELWQRVSLDMTTFSP
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgccgagtgggaggacggcgagcgcttctcgttcgaggattcggac
cgcttcgaggaggactcgctctgctcgtttatctcagaggccgagagcctgtgccagaac
tggcggggatggcgcaagcagtctgcggggcccaactcccccaccggtggcggcggcggc
gggggcggcgggggccgcagccgagatggcctggtgatccccttggtggagctgtcggca
aagcaggtggcattccacatcccatttgaagtggtggagaaagtttacccccctgtgcct
gagcagctacaactccgaattgccttctggagcttccctgagaatgaagaggacatacgg
ctctattcgtgcctggctaatggcagtgcggatgaattccagcgtggggaacagctgttc
cgaatgagggctgttaaggacccgctacaaatagggtttcacctgagtgccacagtggtg
ccccctcagatggttccccctaagggtgcatacaatgtggccgtgatgtttgaccgatgc
cgggtcacctcctgcagctgcacctgtggggctggcgccaagtggtgcacccatgtagtg
gcactttgcctcttccggattcacaacgcttcagcagtctgccttcgggctcctgtctca
gaatctttgtctcggctccagagggatcagctccagaagtttgctcagtatctcatcagt
gagctccctcagcagatccttcccacagcgcagcgcctcctggatgagctcctgtcctcc
cagtctactgccatcaatactgtgtgtggggccccagaccccactgcaggtccttcagct
tctgaccagagtacctggtacctagatgagtctacgctcagtgagaacatcaaaaagacc
ctgcacaaattctgcggcccctccccagtcgtcttcagtgatgtaaactcaatgtatttg
tcatcaacggagcccccagcagctgctgaatgggcgtgtctcctgcgtcctcttcgcggg
cgagaacctgaaggtgtctggaacctgctgagtattgtgcgtgaaatgttcaaaaggaga
gatagcaatgccgctccgctgttggagatccttacggaccagtgtctcacctatgagcag
atcacaggctggtggtacagtgttcgaacgtcagcttcccacagcagtgccagtggacat
acaggccgaagtaatgggcagacagaggtggctgcccacgcatgtgcaagcatgtgtgat
gagatggtcactctgtggaggttggctgtgctcgacccctcaattagcccacagcgtcgc
cgggacctgtgtgcccagctgcgccagtggcacctgaaggtgattgagaatgtcaagcgg
ggtcagcacaagaaagccttggagcgactattcccaggtttccgccctgctgtggaggcc
tgcgatttcagctgggaagaggcctacccactccctggcgttacctacagtggctctgac
cgaaaactggctctctgctggtcacgaacccttccacctcggtctggccctccccgctcc
gggggccctgatgaagctggggaccagccccggccacccccaccagacccttcagttaga
cctaaagagccaggggccaagcgcaaggggtcaggtgagggggttccccagtcccaacgt
ggcccccgccgcccttcagctgagggaggagataagtcttcacacaagcagggtctaggt
ggaggcaaggcaaagctccagggtggagggtgtggtggcaaaggcccagtgagtggcggg
ggcaaacgtcggctgagcagtgaagacagctccctggaacctgacctggcagagatgagc
ttggatgatgggagcagcctggctctgggggcagaggccagcacctttgggggctttcct
gagagcccaccccatggacttgcccccactacccctctaagtccccccaccttccactct
gaacctcctgatgcctatgaagaagatggtggtgtttacttctcagaggggcctgagccc
ccagttgccccctccagcctaccaggcctgctccctggggaaggaactacccaggatgac
ctcccatccacagatgagagtggtggatgcccccctaaacctaaagacatggcccctgga
gctggggaagaggatgatgactaccaggtgtattacctgaatgcccaggatgggaccggg
ggtgaggaagagaagcccgaggtgggtgctggggaggaacaggacctgtttgctgggctc
aagccactgaaacaggagagccggatggaggtactttttgcctgtgctgaggcactacat
gcccatggctatagcagtgaggcctctcgactcactgtggagcttgcacaggaccttttg
gccaaccctcctgacctcaaggtggaaccacctccagccaagggtaagaagaacaaagta
tccacaagtcgacaaacttgggtggctaccaacactttgaccaaggcggccttcctcctg
actgtgttgggtgagcgaccggagcatcacaacctggccttccgcattggcatgtttgcc
ttggagctgcagcggcctccagcttctacaaaggccttggaggtgaagctggcctaccag
gaatcagaagtggctgctttgttgaagaagatccctctgggtgtgaatgagatgagcacc
atgcgatgccgggcagaggaactccgggaggggaccttgtgtgattaccggccagtgctg
cccctcatcttggccagcttcatctttgatgtgctctgcaccccagtcgtttctcccaca
ggttcccgacctcctagccgaaactggaacaatgaaatgcctggagatgaagagctaggg
ttcgaagcggctgttgctgccctgggcatgaagacaaccgtgagtgaagctgagcatcct
ctcctgtgtgagggcacacgccgggagaagggggacctggctctggcactgatgatcacc
tacaaggatgaccaggccaagctcaagaagatcttggacaagctcctggaccgggagagt
cagacacacaagccgcagaccctgagttctttctactcatccagccgcccggctacatca
agccagaggtccccatctaagcatggggcccctgctgcggggggagccctgcagccactg
cctccaggctcggcagggggtgcccagccaggggctgtggctggggtcaatccagaccca
gctgagggcttcacagagaagactgtggctgagagctccccgcgttccccttgtgagggc
cccccacctgaggctgccgtggcccccaaaccagaggggaaggttccaagtcgcttggca
cttggcagccgaggaggctacaatgggcggggctgggggtccccaggacggcccaagaag
aagcacacaggcatggccagcattgacagcagtgcccccgagacgacatcggacagctcc
ccaaccctgagccgaaggccactgcgggggggctgggcccccacctcctggggccggggt
caggacagcgacagcatcagcagctcatcctccgactctctgggctcctcctcctccagt
ggcagccgccgtgccagtgcaagtgggggtgcccgggccaagacagccgaggttggcagg
tacaagggccgtcgcccagagagccatgccccccatgtacccaaccagccatcagaggca
gctgcgcatttctactttgagttggcaaaaacagtgttgatcaaggccggaggaaacagc
agcacctccatctttacccacccgtcttcgtcagggggccaccagggcccccaccgaaat
ctgcatctttgcgccttcgagatcggactttatgctctgggtctacacaatttcgtctca
cccaattggctctctcggacctactcttcccacgtttcctggatcacaggccaagcaatg
gagattgggagtgcagcgctgaccatcctggtggagtgctgggatgggcatctcacaccc
cctgaagttgcttccctggctgaccgggcttcacgggcacgggactccaacatggtgagg
gcagcggccgagttggctttgagctgcctaccccacgcccacgccctgaaccccaacgag
atccagcgagctttggtacagtgcaaggagcaggataacctcatgctggagaaggcgtgc
atggccgtggaggaggcagccaagggtgggggtgtgtaccctgaagtgttgttcgaagtc
gcccaccagtggttctggctttatgagcagacggtgggaggctcagccacaccacgtgag
ggtgccacaggctgcagtgccagtggggcccgggcatcgggggaggctgggcgggcgctg
cccgagggccgtggcggaccggggaccgaggcagtcacagtgtcagcagcggcagtgacg
gcagcagctacagtggtaccggtcatttcagtggggtccagtttgtacccagggcctggc
ctgggacatggccactccactggcttgcacccctataccactctgcagccccacctgccc
tgcaacccccagtaccttacccaccctggtcaccccttgccccatatgcctcggcctgct
gtttttcctgtgcccagctctgcatacccacagggtgtgcaccatgcattcctgggtcct
cagtatccctactcagtgacaccgtcctcccttgctgccacagcagtatccttccccgtc
ccttccatggcgcccataacggtgcatccctaccacactgaatcaggactcccactacct
accatgaacaatgtccatactcccagcagcatccatcaaagctcctcctatcctgccatt
cagggcaactcaatgtccaccataagtacccagtcgagctccctggtaagtgggagtttt
ccccctccggaggaggagacgcacagccagcctgttggcacccagagtctgcatcacttg
cacgctgcctatagagttggaatgctggcactggagatgttaggccgacgggcacacaat
gatcaccccaacaacttctctcgtagccctccctataccgaggatgtcaaatggttgctg
gggctagcagctaagctgggagtgaactacgtgcaccagttctgtatgggggcagccaag
ggggtgctgagcccatttgtgctacaggagatcgtcacggagacgttgcagcggctgaac
cctgcccatgcgcatacccacctgcgcaccccagccttccaccagctggtccaacggtgc
cagcaggcatacatgcagtacatccaccaccgcctgatccacctgacccccgccgactac
gacgactttgtgaacacaatccgcggcgcccgcagcgccttctgcctgacccctatgggc
atgatgcagttcaacgacattctgcagaacctcaaacgcagcaagcagaccaaggagctg
tggcagcgtgtctcgcttgacatgaccaccttctccccttga
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integrated database retrieval system
