Monodelphis domestica (gray short-tailed opossum): 100011550
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Entry
100011550 CDS
T01031
Symbol
COL15A1
Name
(RefSeq) collagen type XV alpha 1 chain
KO
K08135
collagen type XV alpha
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100011550 (COL15A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mdo00535
]
100011550 (COL15A1)
Proteoglycans [BR:
mdo00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100011550 (COL15A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Laminin_G_2
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
100011550
NCBI-ProteinID:
XP_007499081
Ensembl:
ENSMODG00000029358
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All DBs
Position
6:complement(138210861..138435770)
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AA seq
1263 aa
AA seq
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MLSRQSWGSRGLSVLLWPALISAVTLAQITDEQGSKGHLDLTELIGVPLPSSVSFITGYG
GFPAYSFAPGANIGRPTRTLIPETFYTDFAISVTVKPDSNHGGVLFAITDAFQKIIYLGL
RLSQVQDGTQKIILYYTEPGSHVSQEAASFKVPVMTNKWNRFTVVIEGSDVILLVDCEEH
NRIQFLRSSQALRFESSSGIFVGNAGATGLERFTGSIQQLTIQPDPHPSKDQCEDDDPYA
SGETSGFQEAEDVAEIQEAITYTQPPPEETKAEPVEEPPTTLPESKEMELSGDAETEDGP
EAEDNPTAKDTSKTEDSPEITNSSYTNSSNSEQGSGDIVHDKQEEDNATDSDPEAETKNA
QEFGSGNEEFLEISGDKDTTDEENLTETQTPTRSPEKDDENNLPTYGPSQPGPTVQPGRG
DILGERGLPGPKGQAGPKGEKGDPGEGQPGLPGFPGSPGPTGPPGTLGIMEIDGSGFVSG
SGSGSGSGFGSDSDSSSVNFEVSGELLRGPTGPPGPPGEPGLPGEPGSELHIGPPGSPGE
DGPSGEPGPPGPDGHPGLNGAAGLPGMKGEKGEKGPNGSIGEKGDSGKRGLPGPPGKDGV
VGEPGPPGLPGPPGPPGASCGMGLGFEDIEGSGSVSLLSEPKTPGPTAPNGSKGEKGDQG
PKGEKGRDGESLIGPPGPPGPPGPPGRTVAVTSSILNGTDGIENIAELPELTGPPGPKGP
KGDTGFPGLPGEKGEKGEPGTIFTGNIPLERLMLKKGEIGIQGPPGPMGPKGPPGHKGEL
GFPGRPGRPGLNGLKGAKGERGMVLLGPPGLPGPPGPPGPPGAMINIKGTVFPISPRPHC
KTPVATTHPGNQELITFHGVKGEKGSWGLPGQPGPKGEKGDEGEPGPPGPPFPITYLKHF
MDRMKGESGNKGIKGEKGDSNGVFFMPGPPGLPGSPGQVGQKGDSVIGPRGLPGPPGLPG
PIGYGAHGPPGPPGPQGPPGPPAILGSAVALPGPPGPPGQPGLPGSRNLVTTFGNIESMM
QNAHLVIEGTLIYLSESTEFFIRVRDGWKKLQLGELIPIPADSPPPPAISSNIQQPLPPP
IPASNTYSEKPALHLVALNMPFSGDIRADSQCFQQAQAAGLLSTYRAFLSSHLQDLSTIV
RKSDSYSLPIVNLKGEILFYNWESIFSGHGGQFNNQVPIYSFDGRNVMTDPSWPQKVIWH
GSNTNGIRLVSNYCEAWRTADIAVTGNASPLSTGKILDQKTYSCANKLIVLCIENSFMTD
IRK
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaaggcagagttgggggtcccggggtttgtcggtcctgctctggccagcgctg
atttctgctgtcaccctcgctcagatcacggacgaacaaggatcgaaaggccaccttgat
ctcacagaactaattggagtcccactgccttcatccgtctcctttatcactggctatgga
ggatttccagcttatagttttgcaccaggtgctaacattggccgtccaacaagaacttta
attcctgagacattctacacagattttgcaatcagtgtaactgtaaagcctgatagcaac
catggaggtgtattatttgcaataacagatgcatttcagaaaattatttacctaggactg
aggctctcacaagttcaagatggcacccagaaaataatactgtattatactgagcctggc
tcccatgtttcccaagaggctgcctcatttaaagttccagtaatgactaacaaatggaac
cggtttacggttgtcattgaaggaagcgatgtgatactccttgtagattgtgaggaacat
aaccgcattcaatttctgaggtcatcccaagccttgagatttgagtccagctcaggtata
tttgttggaaatgctggagccacaggactagaaagattcactggctcaatacaacagtta
accatccagccagatccccacccttccaaggaccaatgtgaagatgatgacccgtatgca
tccggagagaccagtggttttcaggaagcagaagatgttgctgaaatacaagaagccatc
acatatactcaacccccacccgaagaaacaaaagcagagccagttgaagaacctccaaca
acactacctgaatctaaggaaatggagctttcaggtgatgctgagactgaggatggtcct
gaggctgaggataaccctacagctaaagatacctctaaaactgaggatagccctgagatc
accaactccagttatacaaactctagcaactcagagcaaggatctggtgatatagttcat
gacaaacaagaagaagacaatgctactgacagtgacccagaagcagagaccaagaatgct
caagagtttggttcaggaaatgaagaattccttgaaataagtggagacaaggatacaaca
gatgaagaaaatttgacagaaacacaaacacctaccagatctcctgaaaaagacgatgaa
aacaaccttccaacttatggtccgagccaacctgggccaacagtacaacctggaagaggt
gacatcttgggtgaaagaggactcccaggaccgaaaggacaggctggccctaaaggggaa
aagggtgatcctggtgaagggcagccaggtcttcctgggtttccaggttcccctggacca
actgggcctcctggaacattgggtataatggagatcgatggctctggctttgtctctggt
tctggctctggctctggctctggttttggttctgattctgattccagctctgttaacttt
gaagtcagtggagaacttctgagaggacctactggacccccagggccaccaggagaacct
ggtcttccaggagagccaggatctgaattacatataggaccccctggttcacctggagaa
gatgggccatctggtgaaccaggtcctccaggtcctgatggtcatccagggcttaatgga
gctgctggtcttccaggaatgaaaggagaaaagggtgaaaaaggtcctaatggctccatt
ggtgaaaagggtgactctggaaaaagaggattaccaggccccccagggaaagatggggtt
gttggggagcctggcccccctggcctccctggtcctcctggaccccctggagccagctgt
ggaatgggacttggatttgaggatatagaaggctctggaagcgttagtttgttgagtgaa
cccaaaactccaggaccaacagcaccaaatggttccaaaggagaaaaaggagaccaagga
ccaaagggtgaaaaggggcgtgatggagaaagtttaattgggccaccaggaccaccagga
ccaccaggaccaccaggaaggactgttgctgtgaccagttcgattctcaatggcactgat
ggaatcgagaatattgctgaacttcctgaactaactggcccaccgggaccaaagggacca
aaaggtgacactgggtttccagggttgccaggagaaaagggtgaaaagggtgaaccagga
accatttttactggcaatattcccctggagaggctgatgttgaaaaagggtgaaattgga
attcagggaccaccagggccaatggggcccaaaggaccacctggacataagggagaatta
ggtttcccagggcgaccaggaagaccgggtctgaatggactaaaaggtgccaaaggagaa
cgtggaatggtactattaggcccacctggcttgcctggtcctcctgggcctcctggacca
ccaggagctatgattaacatcaaaggtacggttttcccaatttctcccagacctcactgc
aagacaccagttgctactactcatcctgggaatcaagaactaataacttttcacggtgtt
aaaggagaaaaaggttcctggggtctacctgggcagccgggcccaaagggtgaaaaagga
gatgaaggtgaacctggtccaccaggtcccccatttcctattacatacttgaaacacttt
atggatagaatgaagggcgagtctggaaacaaagggatcaaaggtgaaaaaggagactcc
aatggtgtattttttatgcctgggcctcctggactcccaggaagtcctggacaagttggc
cagaaaggtgattctgtcattggacccagaggcctcccaggaccaccaggtttgcctgga
cctattggctatggagctcatggacccccaggacctccaggaccccaagggccaccggga
cctccagcaatattgggatcagcagtggcacttccaggcccacctggccctccaggccaa
ccaggacttccaggatccaggaacctggtaacaacatttggaaatattgagagtatgatg
caaaatgctcatttggtgatagaaggcacactaatctatttaagtgaaagtactgaattt
tttatacgtgtaagagatggatggaaaaaattacagcttggagagcttattcccattcct
gctgatagcccaccacctcctgcaatttccagcaatattcagcagcctctacctccacca
attccagcttcaaacacctattctgagaaaccagcactccacctagttgctttgaatatg
ccattttctggagacattcgagcagattctcagtgcttccaacaggcccaggcagctggt
ttattgtccacgtatagagctttcttatcatcccatttgcaagatctgtccacaattgtg
agaaaatcagacagctacagcctgccaatagttaatcttaagggagaaatactattctat
aattgggagtccattttttctggccatggaggtcaattcaataaccaagttccaatatat
tcctttgatggccggaatgttatgacagacccatcatggcctcagaaggtaatatggcat
ggctccaacacaaatgggattcgactggtaagcaactactgtgaagcatggagaacagca
gatatagctgtaacaggaaacgcatcaccactgagcacaggaaaaatcttggatcaaaaa
acctatagttgtgctaacaaactcattgttttatgtatcgaaaacagctttatgaccgat
ataagaaaatga
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integrated database retrieval system
