Monodelphis domestica (gray short-tailed opossum): 100012047
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Entry
100012047 CDS
T01031
Symbol
SLC1A6
Name
(RefSeq) solute carrier family 1 member 6
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04082
Neuroactive ligand signaling
mdo04721
Synaptic vesicle cycle
mdo04724
Glutamatergic synapse
mdo05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100012047 (SLC1A6)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100012047 (SLC1A6)
04721 Synaptic vesicle cycle
100012047 (SLC1A6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100012047 (SLC1A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdo02000
]
100012047 (SLC1A6)
Transporters [BR:
mdo02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
100012047 (SLC1A6)
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Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
100012047
NCBI-ProteinID:
XP_001366236
Ensembl:
ENSMODG00000014481
UniProt:
F7FKW4
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Position
3:complement(477266462..477318974)
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AA seq
564 aa
AA seq
DB search
MSSHANSLFLRESVSQRLGGQSWLQGFQDSMQQRAARTRLQIQTMNRERVLRFLKRNAFI
LLTVSAVVIGISLAFALRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLITGMASL
DNKASGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGLHREGRIESIPTADAFM
DLVRNMFPPNLVEACFKQFKTQYSTRVVTRTVMKMENRTGLGISPSPFSLMDNGTSVLDN
VTRALGTLQEVMSFEETVPVPGSASGINALGLVVFSVSFGLVTGSMKQKGHALKVFFNSL
NEAIMRLVGVIIWYAPVGILFLIAGKILEMEDTAVVGGQLGMYTLTVIVGLLIHAGGVLP
LLYFLITHKNPFPFIAGMLQALITAMGTSSSSATLPITFRCLEENLGVDRRITRFVLPVG
ATINMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASIGAAGIPQAGLVTMVIV
LTSVGLPTEDITLIIAVDWFLDRLRTTTNVLGDSVGAAIIEHLSRKELELQDAELSLPSL
GKSYQLIAQEKGANRARGGNESNM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccacgccaatagtcttttcctgagggaaagtgtttcccaacgccttgggggg
cagagttggctacaagggtttcaggactccatgcaacagcgtgctgcccgaacccggctg
caaatccagactatgaaccgggagagagtgctcagattcctgaagagaaatgccttcatc
cttctcacagtcagtgctgtggtcatagggatcagtcttgcctttgccctgcgtccttac
cagctgacctatcgacagattaaatacttctcttttcctggagaacttttgatgaggatg
ctgcagatgttggtgttgcccctcattgtttccagtctaatcacaggtatggcatccctg
gacaacaaagcttcagggagaatggggatgcgggctgctgtttactacatggtgacaaca
gtcattgcagtcttcattggaatcctcatggtcacaatcatccaccctggcaaaggatcc
aaggaaggactgcatcgagagggccgcattgaatctatcccaacagctgatgccttcatg
gaccttgtcaggaatatgttcccacccaatcttgtggaagcctgcttcaaacagttcaag
acacagtacagcaccagggtagtgacgaggactgtcatgaagatggaaaacaggacagga
ttgggtatctccccttcacctttttctctgatggacaatggtaccagtgtcttggacaat
gttacccgtgcccttggcaccctccaggaggtaatgagttttgaggagactgtgcctgta
cctggctcagctagtggcatcaatgctctgggcttggtggtgttctcagtcagctttggc
ctggtcactgggagcatgaaacaaaaaggccatgccctgaaggtattcttcaacagcctc
aatgaagctatcatgagactcgttggtgtcattatctggtatgctcctgtgggtatcctt
ttcctcattgctgggaagattctagagatggaggatacagcagtggttggtggccagttg
ggcatgtacacactgacggtcatcgtgggcttgctcatccatgctgggggtgttcttcca
ctcctctacttcctcatcacacacaagaatcccttccccttcatcgctggtatgctgcag
gctctcatcacagccatgggcacttcctccagctcagcaactctgcccatcaccttccga
tgcttggaggagaaccttggtgtggatagacgcatcaccaggtttgtcctgcctgttgga
gcaaccatcaacatggatggcactgccctctatgaagccttggcagctatcttcattgcc
caagtcaacaactatgaactcaacctgggacagatcaccaccatcagcatcacggccact
gctgccagtataggggcagcaggcattcctcaggctggccttgtgaccatggtcattgtg
cttacatcagttgggctcccaactgaggacatcacactcattatagctgtggattggttc
ttggaccgtctccgaactactactaatgttctgggggactcagtaggtgctgccatcatt
gagcatctgtctcggaaggagctggagctacaggatgctgagctaagcctcccaagcctt
ggaaagtcttaccagctcatcgcccaggagaagggagccaacagagctcgaggaggcaat
gaaagcaacatgtga
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integrated database retrieval system
