Monodelphis domestica (gray short-tailed opossum): 100012107
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Entry
100012107 CDS
T01031
Symbol
VPS53
Name
(RefSeq) VPS53, GARP complex subunit
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100012107 (VPS53)
Membrane trafficking [BR:
mdo04131
]
Protein recycling
Others
EARP complex
100012107 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
100012107 (VPS53)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
GrpE
Sec8_N
Snf7
Laminin_II
NBD94
Syndetin_C
COG3_N
PsaD
COG5_N
FUSC
XhlA
Motif
Other DBs
NCBI-GeneID:
100012107
NCBI-ProteinID:
XP_001364702
Ensembl:
ENSMODG00000010127
UniProt:
F6WN34
LinkDB
All DBs
Position
2:516163651..516321685
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AA seq
832 aa
AA seq
DB search
MMEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDRADFNAVEYINALFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRHALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLVANVLEPRIKQEIVKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPHEWYMTERIAVEFCHVTRVELAKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFSGCTLSDGAPKKVEVPPPSTNPFLEDEPGPEMEELTMDKGDLDQPKKPKVPENPFHGI
ISKCFEPHLYVYIESQDKNLGELIERFVADFKAQGPPKPNTDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSTSGGLTISSLLKEKEGSE
VAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDASLIERINLTGEMDTFSTVISN
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNLIKLLTDCNTETFQKILDMKGLKR
SEQSSMLELFRQRLPTPPSASEGTGSTSLTAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggagctcgagttcgtggaggagctggaagccgtgctgcagctcacc
ccggaggtgcagctcgccatcgagcaggtgtttccaagccaggatcctctggatagagca
gatttcaatgctgtggaatacattaatgcccttttcccaacagaacagtctctggcaaac
atagacgaagttgtgaacaaaattcgattgaaaataaggagactggatgacaacattcga
acagttgtgagaggtcagactaatgtggggcaggatggaaggcacgcattggaagaggct
cagaaagccatccagcaactcttcggcaaaattaaggatatcaaagacaaagcagaaaaa
tcagagcaaatggttaaggaaattactcgggacattaaacagctagaccacgccaaacgc
cacctgaccacttccataaccacgctgaaccacttgcacatgttggcagggggtgttgat
tctcttgaagccatgacaaggcggcgacagtatggagaagttgccaaccttctacagggc
gtagtgaacgtcttggaacacttccacaagtacatgggaattccacagattcgacagctt
tcagagagagtaaaggcagcccagactgagttaggacaacagatcctggctgattttgaa
gaagcttttccttcccagggcaccaagaggccgggaggccccagcaatgtcctgcgagat
gcatgtctggttgctaatgttttggaacccaggatcaaacaggaaatcgtcaagaagttt
attaagcagcacctgtctgagtacctggtgctctttcaagaaaaccaagatgttgcctgg
cttgacaaaattgacagacgctatgcctggataaaacgccaacttgtggactatgaagag
aaatatgggcgtatgtttccacatgagtggtacatgaccgagaggattgctgtagagttt
tgccatgtcacaagggtggaacttgccaagattatgcgtacccgagcaaaggagatagag
gtgaaattgcttctgtttgctattcagaggactaccaacttcgagggacttctagccaag
cgcttctctggctgtaccctgtcagatggtgctccgaaaaaggtagaggtccctcctccc
tccaccaatcctttcctggaagatgaacctggccctgagatggaagaattgacaatggac
aaaggggatttagatcagccaaagaagccaaaggtcccagaaaacccatttcatggtatc
atatccaagtgttttgagcctcatctctacgtgtatattgaatcccaggacaagaacctt
ggagaactgattgagcgatttgttgctgattttaaggcccaggggcctcccaaaccaaac
accgatgaaggcggtgccgtgctgcccagctgtgctgacctctttgtctattacaagaag
tgcatggtacagtgctcccagctcagcactggggagccgatgattgctctgaccaccata
ttccagaaatatctccgggaatacgcatggaaaatactctctggcaacttaccaaagacc
accagcaccagtggagggctgaccattagtagcctcctcaaggagaaggagggctctgaa
gtggccaagttcactctagaggagctctgccttatctgcagcattctgagtacagctgag
tactgcttggccacaacccagcagcttgaagaaaaactcaaagaaaaagttgatgcaagt
ctgattgaaaggatcaacttgaccggggagatggacacattcagcactgtcatctccaac
agtattcagttgctggttcaggatcttgacgctgcctgtgatcctgctcttactgccatg
agcaagatgcagtggcagaatgttgaacatgttggtgaccagagtccatatgtcacctct
gtgattctccacataaagcagaatgtccccatcatccgggacaacctggcctccacacgc
aagtacttcactcagttctgcatcaaatttgcaaactccttcattcccaagtttatcaac
catctattcaagtgcaagccaattagcatggtgggagcagaacagctgctgctagatacc
cattctctgaagatggtcctcctggatctgccttccattggctcacaagtggtgaggaaa
gcgcctgccagttacaccaaaattgtcgtgaagggcatgacccgagctgagatgatcctg
aaggtggttatggcccctcatgagccattggtggtgtttgtggacaacctcatcaaactc
ctcacagactgtaacacagaaaccttccagaagatcctggacatgaagggccttaagaga
agtgagcagagcagcatgctggaactcttccgccagcggctccctaccccaccatcagca
tcagaggggactggctctacatccctgacagcgccaacacctgaacaagaatcatcccgc
atccgaaaactggagaaactcatcaaaaagaggctttga
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