Monodelphis domestica (gray short-tailed opossum): 100012379
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Entry
100012379 CDS
T01031
Symbol
SYDE1
Name
(RefSeq) synapse defective Rho GTPase homolog 1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100012379 (SYDE1)
Membrane trafficking [BR:
mdo04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
100012379 (SYDE1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
100012379
NCBI-ProteinID:
XP_001366670
Ensembl:
ENSMODG00000014508
UniProt:
F7F6S9
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All DBs
Position
3:477430248..477445756
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AA seq
757 aa
AA seq
DB search
MAEPLLRKTFSRLRGREKLPRKKSDVKDRGRPALIPEPSVPEPAPDLPKPEPITQVTGPG
EEEPPSPEVSRNPARGAYLQSLESSSRRWVLGGSKVPEETVLGPGGPTELAGEIWYNPIP
EEEPGSLASGGTTPQATQANQESAAPGGAAPEVIPSNAPAKSSRTKSPGPARRLSMKMKK
LPELRRRLSLRGPRSRGEREAERERAAPAGSVISRYHLDSSVGAQRCTEGAQGSQAGYLS
DGDSPERPPHPSPAAFRPYEAAPPPRASPPALWGRLSLHLYGLGGLRLPPGPTPPNLCCL
LQVDGAPRARTGPLRGSGTDFLRLDHTFHLELEAAHLLRALILAWDPCIQRHRSCAHGTV
LLPSLFRGCRAQQLAVRLEPQGLLYAKLTLWEQQEAPGSQEPRVFGLPLPLLVEREQAPG
HVPLIIQKCIGQIERRGLRVVGLYRLCGSAAVKKELRDAFERDSAAVSLSEDLYPDINVI
TGILKDYLRELPTPLITPPLYQVVLEAMRQGPPSSSRVNPQGTRELLQCLPEVERATLTL
LLDHLRLVSSFHTHNRMTPQNLAVCFGPVLLPPRQTPTRLRGRCPVPGSGSGSGLASAVD
FKRHIEVLHYLLQAWPDPRRPPDPPDSVPYLRPKRQPLLDLPLGEPEVVTRPRDRGGPES
PPSNRYAGDWSICGRDFLSYGRDFLSGPDYDQVAGSDSEDDEDEGRGQAGAGDFEGDFAL
MDDDPEAPFNTRLNLKDFDTLILDLERELSKQINVCL
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccgctactcaggaaaaccttctcccgccttcggggacgggagaaacttccc
cggaaaaagtcggatgtgaaggatagaggccgcccagccctgatccccgaacccagtgtc
cctgagccagcacccgacctccccaagccagagcccataacccaggtgacagggcctggg
gaagaggaacctcctagccctgaagtgtcaagaaacccagcccggggggcctacctgcag
agcctggagtccagcagccgtcgctgggtgctgggaggcagcaaggttcctgaagaaaca
gtgctgggacctggagggcccactgaactagctggagagatctggtacaaccctatccca
gaagaggagccaggaagtctggcatctggggggaccacaccccaggccactcaagccaac
caggagagtgcagcccctgggggagcagccccagaagttatccccagcaatgcccctgct
aaatcatcacgaaccaagtctccaggccctgcaaggcgcctctcaatgaagatgaaaaag
ttgcctgagctgaggcggcgactgagcctcagggggcccagaagccggggagaacgtgag
gctgaacgggagcgggcagccccagctggctcagtcataagccgataccacctggacagc
agtgtgggagcacagaggtgtacagagggagcccaggggagccaggctggctacctcagc
gatggtgactcccctgaacggcctcctcacccatctcctgctgccttccggccctatgaa
gcagcccctccaccccgtgcctcaccccctgccctctgggggcgcctcagcctgcaccta
tatgggctggggggcttgcgcctgccaccaggacccaccccaccaaatctctgctgtctg
ctccaagtggatggtgccccaagagccagaacaggaccacttcgggggagtggtactgac
ttcctgaggcttgaccacaccttccatctagagctggaggctgcccatcttctccgggcc
ctaattctggcttgggacccctgtattcagcgccaccggtcctgtgctcatggcactgtg
ctgctgccttctcttttccgagggtgccgggcccagcagctagcagtgagactagaaccc
caaggcctgttatatgcaaagctgacactctgggagcagcaggaagccccaggaagccaa
gaacccagagtctttgggttacctctgccactgcttgtagagcgggaacaagctccaggt
cacgtgcccctcatcatccagaagtgcattgggcagatcgagagaagggggctccgggtg
gtgggattgtaccggctatgtggctcagctgctgtaaagaaggagcttcgagatgccttt
gagcgagacagtgcagcagtcagtctctccgaggacttgtatccagacatcaatgttatc
acagggatcctcaaggactacctaagagagctacccacaccgctcatcaccccaccactc
taccaagtggtcctggaggctatgaggcaggggccacccagctccagcagggtaaaccca
caagggaccagagaactcctccagtgtctgcctgaagttgagagggccacactgacattg
ctcctggatcacctgcgcctggtctcctccttccacacccacaaccgcatgacccctcag
aacctagctgtctgctttgggcctgtgctgctgcccccgcgccaaactcccacacggctc
cgagggcgctgccctgtccccggctccggctcaggttccggcctcgccagcgctgtggac
ttcaaacgtcacattgaggtgttgcactatctgcttcaggcctggccagacccccgccgc
cccccggatcctccagacagcgtcccctacctccgcccgaagcggcagcccctgctggat
ctgccgctgggggagcccgaagtggtgacacggcctcgagaccgaggtgggcccgagagc
ccccctagtaaccgttacgctggcgactggagcatctgcgggcgggacttcctttcttat
gggcgtgacttcctgtccggcccagattatgaccaggtcgcagggagcgacagtgaggac
gatgaggatgaaggcagaggtcaagcgggagctggtgactttgagggggactttgccctc
atggatgatgaccctgaggctcctttcaacacccgcctcaacctaaaagactttgacacc
ctgatcctggacctggagagggagctgtccaagcaaattaacgtgtgcctctga
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