KEGG   Monodelphis domestica (gray short-tailed opossum): 100012402
Entry
100012402         CDS       T01031                                 
Symbol
ELL
Name
(RefSeq) elongation factor for RNA polymerase II
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100012402 (ELL)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mdo01009]
    100012402 (ELL)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdo03021]
    100012402 (ELL)
Protein phosphatases and associated proteins [BR:mdo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100012402 (ELL)
Transcription machinery [BR:mdo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     100012402 (ELL)
    Little elongation complex (LEC)
     100012402 (ELL)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing SPATS2-like DUF6185
Other DBs
NCBI-GeneID: 100012402
NCBI-ProteinID: XP_001362873
Ensembl: ENSMODG00000003470
LinkDB
Position
3:complement(451508165..451674099)
AA seq 611 aa
MAALKEARSYGLSCGRVSDGSKVSVFHVKLTDSALRAFESYRGGQESVSLRPSIRFQGSQ
GHITIPRPGYPTEVRTFTFYLSNIGRDSPQGSFDCIQQYVSSNGNVHLDCLGSIQDKITV
CATDDSYQKARQSMAQAEEETRSRSAIVIKPGVRYVGKKVQFRKPAPAAADTVPSRKRST
PINVASAIKKSSSGVSQQPFRDRIIHLLALKPYKKPELILRLQKDGLSQQDKDMLDSLLQ
QVANLSAKDSTYTLKDCMYKDVQKDWRGYSEGDQQLLKRILVRKLCQPQNVGSVPGDAPS
SSPPLKDPLNSSSPPQKRSQPLDFIDPLANKKPRISHCTQRTQPTFNGKLNSSNGKEVPS
ASGPPSVANSVSSSSHLPVLELPRPHDPLTDVSNDLCHNGRDCENAEDSERLSLPLLTDC
PQTSKHSCASWHMKTKKKSKKHKEKEKRSEEKHREEKQDSELMKNSDTKTSGALQEGTGL
NGTCNNSSVPTSTSEMPDYLLKYAAISSSEQRQSYKNDFNAEYNEYRDLHARIERITRRF
TQLDAELKQLSQGSEEYETTRGQILQEYWKIKKTNTNYSQEKYRCEYLHNKLAHIKKLIA
EYDQRQLQPWP
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaggaagctcggagctacgggctgtcttgcgggagggtgagcgacggc
agcaaggtgtctgtcttccacgtgaagctcaccgacagcgctctaagggccttcgagagc
taccgcggcggtcaggaatctgtttctttgaggccatcgatcagatttcaaggaagccaa
gggcacatcacaattccccggcctggttatccaacagaagtacgaactttcacattttat
ctttcaaatattggcagggatagcccccaagggagctttgattgcatccagcaatatgtg
tccagcaatggaaatgtccacctggactgcttgggcagtatacaggacaagattactgtg
tgtgccaccgatgattcttaccaaaaagcccggcagagcatggcccaagctgaggaggag
acccgcagccgcagtgccattgtcattaaaccaggagttcgatatgttggcaaaaaagtt
cagttccggaagccagccccagcagctgcagacacagtcccctcaaggaagcgctcaaca
ccaatcaatgttgccagtgccatcaagaagagcagtagtggggtatctcagcagcccttc
agggacaggatcattcatttactggcgctgaaaccttacaagaagccagagctgatcctg
aggcttcagaaggacggcctttcacagcaggataaggatatgctggacagcctcttgcag
caggttgccaacttgagtgccaaggacagcacatacacattaaaagattgcatgtacaag
gatgttcagaaggactggcgtggatactctgaaggagatcaacagttactaaaaagaatt
cttgttaggaaactctgtcagccacagaatgtaggtagtgttcctggagatgcaccttcc
tcaagtccaccactgaaagaccccttgaattcctcatcaccccctcagaaacgatctcag
ccactggatttcattgacccactagcaaataagaagccgaggatatctcattgtacccaa
agaactcagcccactttcaatgggaaactgaactcttctaatgggaaggaagtcccttct
gcttctggcccaccctctgtagccaattctgtcagctctagctctcacctcccagtccta
gagctcccccggcctcacgatcccctcactgatgtcagcaatgacttatgtcacaatggc
agagactgtgagaatgccgaggactctgagcgcctcagtctccctctgctgacagactgt
ccccagaccagcaaacacagttgtgcctcatggcatatgaaaaccaagaagaaatccaaa
aagcacaaagaaaaggagaagcggagtgaagagaaacacagagaagagaagcaggatagt
gaactcatgaagaactccgatactaagacgagtggggctctgcaagaaggcacaggttta
aatggaacatgcaataattctagtgtaccaacatcaacttcggaaatgccggattatcta
ttaaaatatgccgccatttcctcttcagaacaacgtcaaagttataagaatgattttaat
gctgagtataatgagtaccgagatttgcatgcacgaatagagagaattactcgacggttt
acacaactggatgcagagctcaaacagctttcccagggttcagaagaatatgagactact
cgtggtcagattttacaggaatattggaaaatcaaaaagaccaatactaactacagccaa
gaaaagtaccgttgtgaatatctacacaacaaactggcccacatcaagaaactgatagca
gagtatgaccagcggcagctccagccttggccatga

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