Monodelphis domestica (gray short-tailed opossum): 100012495
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Entry
100012495 CDS
T01031
Symbol
PDZRN3
Name
(RefSeq) PDZ domain containing ring finger 3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdo04121
]
100012495 (PDZRN3)
Enzymes [BR:
mdo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100012495 (PDZRN3)
Ubiquitin system [BR:
mdo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100012495 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Prok-RING_4
PDZ_Tricorn
zf-rbx1
TRAF3_RING
zf-TRAF
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
100012495
NCBI-ProteinID:
XP_001364450
Ensembl:
ENSMODG00000003959
UniProt:
F7FYR9
LinkDB
All DBs
Position
6:complement(227513472..227801115)
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AA seq
1057 aa
AA seq
DB search
MGFELDRFDGDVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVQCQRIS
TKELNHVLPLKSLILKLDIKCDHHGRGCERVVKLQQLGEHVEMCDYSPARCRHPGCGEVL
NLKDVDSHMRERCDARPAGLCEQGCGLVLTHGELRPGAHCCFQALKAHSGALQAKVAGLE
KELKKEALRAGKREKSLVAQLAAVQLELQMTALRYQKKFTEYSARLDSLSRSVASPGSKG
EEMKTMTLVLHRDSGSLGFNIIGGRPCVDNQEGSSSEGIFVSKIVDSGPAAKEGGLQIHD
RIIEVNGKDLSKATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPSLDSQLVDMGTQTDI
TFEHIMALTKMASPTPPVLDPYLLPEEHSSAHEYYDPNDYMGSIHQEMDRDELELEEVDL
YRLNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNRE
EAVALLTSEESKNVSLLIARPELQLDEGWLDDDRNDFLDDLHMDMLEEQHHQAMQFTASV
LQQKKHEEDEGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNADDHTTASNTLGS
QRKLMYSQDTLGSGDVPFSNESFISADCTDADFLGIPVDECERFQELLELKCQVKSANPY
SLYYQNSTLEVNKSDPESVDRELEMLNEELRNIELECLNIVRAHKMQQLKEQYRESWMLH
NSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRRI
AENISSDGATACKASQRNLLSITESPETGTPKYCPSPKELELSKQLENKERKTSDESKSP
TQSPKVGGSYLSPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDL
NSSNQSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDAISEMKM
GRYWSKEERKQHVVKAKEQRRRREFMMQSRLDCLKEQQGAEEKKEMNIIELSHKKMMKKR
NKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggatcgcttcgacggcgacgtggacccggacttcaagtgcaatcta
tgcaacaaggtcctggaagaccccctgaccaccccgtgtggtcatgtgttttgcgctggc
tgcgtcctgccctgggtggtgcagcagggcagttgcccggtgcagtgccagcgaatctcc
accaaggagctcaaccacgtcctaccgctcaagagcctcatccttaagctggacatcaag
tgtgaccaccacgggcgcggctgcgagcgggtggtgaagctgcagcagttgggcgagcac
gtcgaaatgtgtgactactcgccggcgcgctgccgccacccgggctgcggtgaggtgctc
aacctcaaggacgtggacagccacatgcgcgagcgctgcgacgcgcggcccgccggcctg
tgcgagcagggctgtggcttggtgctgacccacggcgagctgcggcccggcgcgcactgc
tgcttccaggcgctcaaggcgcacagcggcgcgctgcaggccaaggtggccggcctcgag
aaagagcttaagaaggaggcgctgcgggccggtaagcgcgagaagtcgcttgtggcgcag
ctggccgccgtgcaactggagctgcagatgacagcactgcgctaccagaagaagttcact
gagtatagtgcccggctcgactcgctcagccgcagcgtcgccagcccgggcagcaagggt
gaagaaatgaaaacaatgactcttgtccttcatcgtgactctggctctctgggatttaat
attattggtggccgaccttgtgtggataatcaagaaggatcatccagtgaaggaattttt
gtatcaaaaatagttgacagcgggccagctgccaaagaaggagggctgcaaattcatgac
cggattattgaggtgaatggaaaagacttatcgaaagcaacccatgatcaagctgtggaa
gcgttcaagacagccaaagaacccattgttgtccaggtcttaaggcgaacccctcgaaca
aagatgttcactccttccttagactcccagctagtagacatgggcacccaaactgacatc
accttcgagcatatcatggcactgactaagatggcatctcccaccccaccagtattggat
ccatatctcttgcctgaagagcattcatccgctcatgaatactatgatccgaatgactac
atgggaagcatccatcaggagatggacagagatgagctagagctggaggaggtggatttg
taccggctgaatagccaagacaaacttggtctcactgtgtgttaccggacagatgatgaa
gatgacatcgggatttatattagtgagattgatcccaacagcattgctgcaaaggacgga
cgcatacgagagggagaccgtatcatccaaattaatggtatagaggtgcaaaaccgagag
gaagccgtggcacttctcaccagtgaagagagcaagaatgtctccctgctcatagcaaga
cctgaactccagctggatgaaggatggctggatgatgacagaaatgattttctggatgac
ttacacatggacatgctggaagaacaacatcaccaagccatgcagttcactgccagcgtg
cttcagcagaaaaaacatgaggaagacgagggcaccaccgacacagccacgatcttgtca
aaccagcacgagaaggacagtggtgtggggcgcactgacgagagcacccgcaatgatgag
agctctgagcaggagaacaatgctgacgatcacaccacagcttctaacactctggggagc
cagaggaaactgatgtacagccaggacacccttgggagcggagatgtgcccttcagcaat
gagtcctttatttcagcagattgcacagacgctgacttccttgggatcccagtggatgag
tgtgagcgatttcaagaactcctggaacttaagtgccaagtgaagagtgccaatccctac
agtctgtactaccagaacagcaccctagaagtgaacaagagtgaccccgagagtgtggac
agagagctggagatgctgaatgaagagctccgcaatatcgagttggagtgtctgaacatt
gtcagagctcacaaaatgcagcagctgaaggagcagtaccgagaatcctggatgctgcac
aatagtggatttcggaattacaacaccagcatcgatgtccgaaggcacgagctctcggac
atcactgaactccctgagaaatccgacaaagatagttccagtgcctacaacactggcgag
agctgtcgcagtaccccactcaccctagaaatctccccagataactccctgcggagaatt
gcagaaaacatcagcagtgatggggccactgcttgcaaagcatcccagaggaatctgctc
tccatcacagagagtccagagactggcacccccaagtattgcccctctccaaaagagctt
gagcttagcaaacagctggagaacaaagagaggaagaccagtgatgaaagcaagagcccg
acccagagcccaaaggtgggtggctcttatctctccccctatcatcactccccatacaag
catgcccacatccctgcccatgcccagcattaccagagttacatgcaactgatccagcag
aagtcagccgtggagtatgcccagagccagatgagtctggtcagcatgtgcaaggacttg
aattcctccaaccagtccgaaccccgaatggaatggaaggttaagataagaagcgatgga
actcgctatatcaccaagaggccagtgcgagaccggcttctgcgtgagagagccctgaag
atccgagaagagcgcagtggcatgacgacagatgacgacgccatcagcgagatgaaaatg
ggacggtattggagcaaagaagagcggaagcagcatgtggttaaagcgaaggaacagagg
agaagacgtgagttcatgatgcagagcaggctggattgcctgaaagagcagcaaggagcc
gaagaaaagaaggaaatgaacatcattgaactgagccacaaaaagatgatgaagaaaaga
aacaaaaaaatctttgataattggatgacgatccaagaactcttaacccacggtacaaag
tccccagatggtactagagtatacaattccttcttatcagtgactactgtataa
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integrated database retrieval system
