Monodelphis domestica (gray short-tailed opossum): 100012581
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Entry
100012581 CDS
T01031
Symbol
DHX36
Name
(RefSeq) DEAH-box helicase 36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100012581 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100012581 (DHX36)
03012 Translation factors [BR:
mdo03012
]
100012581 (DHX36)
Enzymes [BR:
mdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100012581 (DHX36)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100012581 (DHX36)
Translation factors [BR:
mdo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100012581 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NACHT
NPHP3_N
AAA_23
ResIII
ABC_tran
Motif
Other DBs
NCBI-GeneID:
100012581
NCBI-ProteinID:
XP_007502408
Ensembl:
ENSMODG00000015820
UniProt:
A0A5F8HEV5
LinkDB
All DBs
Position
7:247665350..247713592
Genome browser
AA seq
1009 aa
AA seq
DB search
MSYEHRQNWGRDSAGPRGSGGGGYGGNRGGGGGRAAGGGGSGGGRGRHPGHLKGRDIGLW
YARKQGQKSKDAERQERAVVRMDERREEQIVQLLNSVQTKNDKDSQPQISWFSPEDHGYG
AEVPVQNKPTSENKFLEKEKKTLDQEKKFIDRGKKLADMGKSFVDRDSEYLLQENEPDVD
LDQQLKEDLKRKKSDPRYIEMQHFREKLPSYGMQKELVNLINNNQVTVISGETGCGKTTQ
VTQFILDDYIERGKGSSCRIVCTQPRRISAISVAERVAAERAEPCGSGHSTGYQIRLQSR
LPRKQGSILYCTTGIILQWLQSDQQLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPD
LKVILMSATLNAEKFSEYFDHSPMIHIPGFTFPVAEYLLEDVIEKIRYMPENTDRKPQFK
RGFMQGHVNRPEKEEKETIYKERWPDYVRQLRGRYSANTIDVLEMMDDDKVDLNLVAALI
RHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKR
TPPGVRKIVIATNIAETSITIDDVVHVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQR
KGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLM
DPPSHDAVLLSINHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL
TIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLTVVNAFEGWEEARRRGFRFEKD
YCWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVSSKNPKDPKSNINSDNEKIIKAVICAGL
YPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEESEFHYNWLIYHLKMRTSSIYL
YDCTEVSPYCLLFFGGDISIQKDKDQETIAVDEWIVFQSPARIAHLVKELRKELDALLQE
KIENPHPVDWKETQSRDCAVLSAILDLIKTQENGTPRNFSPRFQDGYYS
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcaccgtcagaactggggccgcgacagcgccgggccccgcggctcgggc
ggcggcgggtacggggggaaccgcggcgggggcggaggccgcgcggcgggaggcggaggc
agcggcgggggccggggccggcatcccgggcacctcaagggccgcgacatcggcctgtgg
tacgcgaggaagcagggacagaagagcaaggatgccgagcgccaggagagagctgtagtg
cgtatggatgaacgtcgagaagaacaaattgtgcaactgctgaattctgttcaaactaag
aatgacaaagattctcagccacaaatatcctggttttctcctgaggatcatggatatggt
gccgaagttcctgtccagaacaaaccaacttcagaaaataaatttttggaaaaagaaaag
aaaactttggaccaagaaaagaaattcatagatcgagggaagaaattggctgacatggga
aagtcatttgtagatagagattctgaatatctcctgcaagagaatgagccagatgtggat
ttagaccagcaactcaaggaagacctaaaaagaaagaagtctgatcctcgctatattgaa
atgcagcatttccgggagaagctaccctcatatgggatgcaaaaggaattggtaaatttg
ataaataacaatcaggttactgtcataagtggcgagactggttgtgggaaaaccacccaa
gttactcagttcattctagatgactatattgaaagaggaaaaggatcctcctgccggata
gtgtgtacacagccaagaagaatcagtgcaatttcggttgcggagagagtggctgcagag
agagctgagccatgtggcagcggccatagtaccgggtaccagatccgcctgcagagccgg
ttgccaaggaaacaaggttccattttgtattgtacaacaggaatcatccttcagtggctc
caatcagatcagcaattatccagtgttagtcacattgtacttgatgaaatccatgaaagg
aatctgcagtcagatgttttaatgactgttattaaagatctcctaaactttcgacctgac
ctgaaagtaattctgatgagtgcaactttgaatgctgagaagttttcggaatattttgat
cacagcccaatgatacacatacctggttttacattccctgttgctgagtatcttttagaa
gatgtgattgaaaagataaggtatatgccagaaaatacagatcgcaaacctcaatttaag
aggggttttatgcaaggtcacgttaatagaccagaaaaagaagagaaggaaacaatttac
aaggaacgttggccagactacgttaggcagctgcgaggaaggtattcggcaaataccata
gatgttttagagatgatggatgatgataaagttgatctgaatttagttgctgctcttatc
cgacacattgttttggaagaagaggatggtgcaatcttggtattcctcccaggctgggac
aacatcagcactttgcatgacctcttgatgtcacaagtcatgtttaaatcagataggttc
attataatccctttgcattcattgatgcctactgttaaccagacacaggtatttaaaaga
actcctcctggtgttcggaaaatagtcattgctacgaacattgcagaaactagtatcacc
atagatgatgttgttcatgtgattgatggtggaaaaataaaagaaactcattttgacacc
caaaataacatcagtacaatggcagcagaatgggttagtaaagcaaatgccaagcaaagg
aaaggacgagctgggagagttcaaccaggtcactgctatcatctatataatggtcttcga
gccagccttctagatgactatcaattaccagaaattttgagaacaccattagaagaactt
tgtttacagataaagattttaagactgggtggaattgcttacttcctaagcaggttaatg
gatccaccatctcatgatgctgttttattgtctataaatcacctaatggaactgaatgct
ttggataagcaagaggaattgaccccccttggagtccatttggcacgattgccagttgag
ccacatattggaaaaatgattctctttggggcccttttctgctgtttagatccagtgctc
accattgctgcgagtctcagcttcaaagacccctttgtcattccattgggcaaagaaaaa
gtagcagatgcaagaagaaaggaattgtctaagaacacgaagagtgaccacttgacagtt
gtgaacgcttttgagggatgggaagaggcaaggagacgtggtttccggtttgaaaaggac
tattgttgggagtatttcctctcctcaaacacacttcagatgctgcacaacatgaaggga
cagtttgctgagcaccttcttgcagctggatttgtgagcagcaagaaccccaaagatccc
aaatccaatattaattcagataatgaaaagataattaaagctgttatctgtgctggctta
tatcccaaagttgctaaaatccggccaagttttagtaaaaaaaggaaaatggttaaagtt
tgcaccaaaactgatggaacagttaatattcatcccaaatctgtcaatgtggaagaatcc
gagttccattataactggctgatctatcacctgaagatgagaacaagcagcatctatcta
tatgactgcacggaagtgtctccctactgcctcttgttctttggaggtgacatttccatc
cagaaggataaagatcaagagactatcgctgtggatgagtggattgtcttccagtctcca
gcaagaattgcccatcttgttaaggagctaagaaaagaacttgatgcccttttgcaagaa
aagattgaaaaccctcatcctgtggattggaaagagactcaatccagagactgtgctgtg
ctttctgctattctagacttgatcaaaactcaggaaaatgggacgcccaggaacttttct
ccacgattccaggatggatactacagttga
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