Monodelphis domestica (gray short-tailed opossum): 100012914
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Entry
100012914 CDS
T01031
Symbol
NUP160
Name
(RefSeq) nucleoporin 160
KO
K14303
nuclear pore complex protein Nup160
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03013
Nucleocytoplasmic transport
mdo05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100012914 (NUP160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100012914 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100012914 (NUP160)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100012914 (NUP160)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100012914 (NUP160)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100012914 (NUP160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Nup160_C
TPR_NUP160_120_M
Beta-prop_Nup120_160
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
100012914
NCBI-ProteinID:
XP_007497503
Ensembl:
ENSMODG00000019923
UniProt:
F6VNV8
LinkDB
All DBs
Position
5:complement(284683540..284724311)
Genome browser
AA seq
1401 aa
AA seq
DB search
MMAAAGALEKSFVELCGAEREPPRRFRDFIISGPGVGCSSGAVKYAESAGGFYYMESSKL
FSVTRNRFIHWATSGDTLELVEESLDINLLNNAIRLKFQNCNVLPGGVHVSETHNHVIIL
ILTNLTVHRLILPHPSRMYRSELVTENQMQSILTDIGKVDFRDPCNYQLIPMVPGMAPNS
TTSIAWLSSDGEAMFALPSASGGLFVLKLPPHDVPGVVSVVELKQSSVMHRLLTGWMPTS
MRGDQNTSDRPLSLSVHCVEHDAFIFALCQDHKLRMWSYKDQMCLMVADMLEYVPVNKDL
RLAAGTGHKLRLAYSPSMGLCLGVYMHAPKRGQFCVFQLVSTENNRYSLDHISSLFTSQE
TLIDFTLTSTDIWALWHDVESQTIVKYINFEHNVAGQWNPVFMQSLPEEEITIRDDQDPR
ETYLESLFTPGHFTNAAIFKALQIFRRGTERNLDLSWSELKKEVTLAVENELQASVTEYE
FSQEEFRQLQVEFWSKFYACCLQYQEALSRPLALHMNPYSNMMCLLKKGFLSFLVPCALV
DHLYLLPDENLMTEDEATISDDLDIARDVICLVKCLRLLGESISLEMSFMMEMACYHLQS
PERAAEQILEDLIANDVENVMEDICSKLQEIRNPVHAIGLLIREMDYETEIEMEKGFNPT
QPLNVRLNLAQLYGSGTTGSVVCKGVCKIAGTRFLICRDLLILQQLLMRLGDAVLLGANQ
LFQSQQDLLHRTAPLLLSYYLIKWGSQCLASEVPVDTLESNLQHLSVLELTDSNALTSHK
LVSSPQTIVELFFQEVARKHILSHLFFHPKAPLPQTDVNWPQLITTITNFFLQLLWPSNP
GCMFPECLMGSCQYTPLQEYIRLLQPWCQVNVGSCRFMMGRCYLVSGEGHKALECFCQAA
SEVGREEFLDRLIRTEDGEIVSTPRLQYYDKVLRLLDVVGLPELVIQLATLAITEAGDDW
KSQATLRTCIFKHHLDLGHNNQAYEALTQNPDPSRQLDCLRQLVVVLCERSQLQDLVEFP
YVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
LRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVYERPGASPKRNHDGECTAVPTSRQ
VEILELEDLERECSLARIRLTLAQHDPSAVAIAGSSSAEEMVTLLVQAGLFDTAISLCQT
FKLSLTPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSATDEAWRLLSS
YLDKYKCQNNLYHHCVINKLLSHGVPPPNWIINNYKKVDAAELLRLYLNYDLLEEAVDLV
SEYVDAVLGKGHQYFGIEFPLSATSPMVWLPYSAIDQLLQSLGENSANSHNLALHQKILD
KLNDYQEKVDRATRDLLYRRN
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcggcgggagcgttagagaagagtttcgtggagctctgcggcgccgagcgg
gagccgccgcgacgtttccgggacttcatcatctcaggccccggagttgggtgttcatcg
ggagctgtgaaatatgccgagagtgctggtggcttctactatatggaaagcagcaagttg
ttctctgtcacgagaaacaggttcattcattgggccacctcaggagatactttggagctg
gtggaagaatccttggacataaatcttctaaataatgccatccgcctcaaattccaaaat
tgtaatgtcttacctggaggtgttcatgtctctgagactcataatcatgtgatcattttg
attttaacaaatcttacagtacacaggttaatactgcctcacccttcccggatgtacaga
agtgagttggtaactgaaaatcaaatgcagtcaatactcactgacattgggaaagttgat
tttcgggatccttgcaattaccagttaattcctatggttcctgggatggcacccaattca
accacttcaatagcctggcttagcagtgatggggaagcaatgtttgctctgccttcagct
tctgggggattgtttgtccttaaactacctcctcatgatgtacctggtgttgtatctgtt
gtagaattaaaacagagctcagtaatgcaccgtttgctcacaggctggatgccaacatct
atgaggggggaccagaacacttctgaccgccctctcagtctttctgttcactgtgtggag
catgatgccttcatctttgcactttgccaagatcacaagctccgaatgtggtcttacaag
gatcaaatgtgcctgatggtagctgacatgctagagtatgtgcctgtaaataaagacctg
agactggcagctgggactggccacaaattgcgccttgcctattccccttccatgggactt
tgcctaggggtctatatgcatgcaccaaaacgcgggcagttctgcgttttccagttagtg
agcactgaaaataaccgatacagtctagatcatatttcctcattattcacctctcaggag
acactgattgactttaccttaacctccactgatatctgggcattgtggcatgatgttgag
agtcaaacaattgtgaaatacatcaattttgaacataatgttgcaggacaatggaaccca
gtttttatgcagtctctgccagaggaagaaatcactatcagagatgatcaagacccaaga
gagacatatctagagagtctattcacacctggacatttcacaaatgctgctattttcaaa
gctttacagattttccgtcgaggaacagagaggaatttggatctttcctggagtgaacta
aagaaagaagttactttagctgttgaaaatgagctccaggcaagcgttacagagtacgaa
ttctcacaggaagaatttcgacagttgcaagttgaattctggtccaagttctatgcctgt
tgtcttcagtaccaagaagcactctcacggcctcttgcactgcatatgaatccttactca
aatatgatgtgtctgttaaaaaaagggttcctgtcttttcttgtgccctgtgccctagtg
gaccatctctatctcttgcctgatgagaatctaatgacagaggatgaagccaccatttct
gatgatttagatattgcacgtgacgttatatgtcttgtcaaatgtcttcgattgcttggg
gaatccatttctctggaaatgtcattcatgatggaaatggcttgctatcaccttcaatct
ccagagagggcggcagaacagattctggaagacttgatcgcgaatgatgtagaaaatgta
atggaggacatctgcagtaaacttcaggagatcaggaatccagtccatgcgattggactt
cttatacgggaaatggactatgagacagaaatagaaatggaaaaagggttcaatcccact
cagcctcttaatgttcgcctgaaccttgctcagctttatggcagtggcacaacagggagt
gtggtttgcaagggtgtatgtaaaattgctggtactcgcttccttatctgccgagaccta
ttgatcctacagcagctattgatgagactaggagatgctgtgcttttgggagcgaatcag
ctatttcagtctcagcaagaccttctccatcggacagcccccttgctgctgtcatattac
ctcattaagtgggggagtcagtgcttggcatctgaggttccagttgatacactggagtct
aatctacagcatttatcagtattagaattgacagactccaacgctctgacatcacacaaa
cttgtatccagccctcagacaattgtggagttatttttccaagaagtggccagaaaacac
atcctatcccatctcttcttccacccaaaagcacctctcccccaaactgatgtgaattgg
cctcaactaattactacaattactaattttttcttacagcttttgtggcctagcaatcct
ggctgcatgttcccagagtgtctgatgggaagctgtcaatacaccccattacaggagtac
attcgcctactgcagccttggtgtcaagtgaatgtaggctcctgccgctttatgatgggc
cggtgctacctggtttcaggagaaggccacaaggctctggaatgtttttgccaagctgca
tctgaagtgggcagagaagaattcttagatcggttgatccgtacagaggatggggagatc
gtttctacacctcggctacagtattatgataaggttttgcgattattggatgtggttggt
ttgcctgaactggtgattcagttggccacattagcaataacagaagcaggtgatgactgg
aaaagccaggctactttaaggacatgcattttcaaacatcatttggatttagggcacaat
aatcaagcatatgaggccttaactcagaatccagaccccagcaggcagctagattgcttg
cgacaattagtggtagttctctgtgaacgctcccaactccaggatctggttgagtttccg
tatgtgaacctgcataatgaggttgtggggataattgagtcacgtgcccgagcagtggat
ctcatgactcacaattactatgagctcctgtatgccttccacatctatcgtcacaactac
cgaaaggctggcacagtgatgtttgagtatggcatgcgtcttggcagggaagtacgcact
ctccggggtcttgagaaacaaggcaactgttacctggctgccatcaactgcttacggctg
atccgtccagaatatgcttggattgtgcagccagcctccggggcagtgtatgaacgtcct
ggagcctccccaaaaaggaatcatgatggagaatgcacagctgtcccaacaagccgacaa
gttgaaatcttagaactagaggatctagagagggagtgttccttagcccgcattcgcctt
actctagctcaacatgacccatctgcagttgccattgcaggtagctcatcagcagaggaa
atggtcactctcttggtgcaagctggcctttttgacacagccatctcgctctgtcagact
tttaaactctccctaacaccagtctttgagggactcgctttcaagtgcatcaaattgcag
tttggtggtgaggcagcacaggcagaagcatgggcttggttagcagccaatcagctttct
tctgtcattaccaccaaggagtccagtgctactgatgaagcttggaggttgttgtcatct
tacttggataaatacaaatgccaaaataacttgtatcaccactgtgtaatcaataagctg
ttgtcccatggggtgcctccacccaattggattatcaataattacaagaaggttgatgct
gctgaattactccgtctatacttaaactatgaccttttagaagaagctgtggatttggtt
tctgagtatgttgatgctgtcctgggaaaaggacatcaatactttggaattgagtttcca
ctgtctgcaacctctccaatggtgtggcttccatactctgccattgaccagcttcttcag
tcactgggagaaaatagtgccaacagtcacaaccttgctctacaccagaaaatacttgac
aaactgaatgactaccaggaaaaagtcgatcgggcaacacgggatttgttgtatcgccgg
aactag
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integrated database retrieval system
