Monodelphis domestica (gray short-tailed opossum): 100013125
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Entry
100013125 CDS
T01031
Symbol
TAF1
Name
(RefSeq) TATA-box binding protein associated factor 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100013125 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mdo01001
]
100013125 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100013125 (TAF1)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100013125 (TAF1)
Enzymes [BR:
mdo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
100013125 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100013125 (TAF1)
Protein kinases [BR:
mdo01001
]
Serine/threonine kinases: Other
TAF1 family
100013125 (TAF1)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100013125 (TAF1)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
100013125 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
100013125
NCBI-ProteinID:
XP_007507648
Ensembl:
ENSMODG00000004570
LinkDB
All DBs
Position
X:complement(69908256..69944590)
Genome browser
AA seq
1957 aa
AA seq
DB search
MSDSDSDEDSAAGACSGGGGDGDSCGGGGGCCGGGGSGGGGGGGGGGCGGNGNGGGSGPF
SLAGFLFGNINEAGQLEGDSVLDKESKKHLAGLGALGLGNLITEITASEDEVSGTDGVLV
DEEGWVKSTEDAVDYSDITEVAEDESRRYHQAMSSLQPSCPSDDDDDYDADCEDIDSKLM
PPPPPPPGPMRKDDGQDPAVCAVSEDGDGIILPSIIASSSAASEKVEFSSSSDSESEMGP
QETRQTEAKEGKLTLPLAGIMQRDSTKVLPSVTELFPEFRPGKVLRFLRLFGPGKNVSIC
LAKCSEKEEEEAPESWAPEESHEGECSGDPDLERKSPWAYEYAPPPPPEQCLSDDEITMM
APVESKFSQSSGDIDKVTDTKPKVAEWRYGPARLWYDMLGVPEDGSGFDYGFKLRSAQDE
PSTKPGMMEKDLGALEEAGDLLADENFLMVTQLHWEDDIIWDGEDIKHKGTKPQRASLAG
WLPSSMTRNAMAYNAQQGFTATLDDDKPWYSIFPIDNEELVYGRWEDNIIWDALAMPRLL
EPPVLTLDPNDENLILEIPDEKEEMTSNSPSKENKKESSLKKSRILLGKTGVIKEEPQQN
MSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQF
HRPPLKKYSFGALSQPGPHSVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKD
GDLILAEYSEENGPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLH
PGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPN
SKRANTHIRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRT
GMDSNWWVLKTDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEEN
EEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ
KDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTE
QARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEILSTDTDSSSAEDS
DFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLGEEGANDKETGKKEKKDKKGL
LSSGGSHKDDDTASVTSLNSSATGRCLKIYRTFRDEDGKEYVRCETVRKPAVIDAYVRIR
TTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERP
DLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIPNDNEELIKV
EGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRR
TDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRL
YPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPL
LDDDDQVAFSFILDNIVTQKMMVVPDSWPFHHPVNKKFVPDYYKVIINPMDLETIRKNIS
KHKYQNRDAFLDDVNLILTNSIKYNGSDSQYTKTAQEIVNICHQTLSEYDEHLTQLEKDI
CTAKEAALEEADLESLDPMTPGPYTPQPPDLYDTNTSLSMSRDASVYQDESNMSAMDTPT
TTPEKRGVQEEDADEEEGSAQQPQSSVLYEDLLMSDVEDEEEDAGSDDEGDNPFSSIQLS
ESGSDSDMESGGMRPKQPHMLQENTRMGMDNDESMMSYEGDTAETSHGMEDSNISYGSYE
EPDPKSNTRDTSFSSIGGYDVSEEEEEEEEEEEEEEEEEEQEEEDEEEDEEDEEDEEEEE
EQRGGPSVLSQVRLSEDEDDSEDCHSIAADSDLDSDE
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggacagcgatgaagattcggccgccggcgcttgcagtggcggcggtggc
gacggggacagctgcggcggcggcgggggctgctgcggcggcggcggcagcggcggtggc
ggcggaggcggcggaggaggttgcggcggcaacggcaacggcggcggcagtggtcccttc
tccttagccggctttctcttcggaaacatcaacgaggctgggcaactggagggggacagt
gtcctggacaaggaatctaagaagcacttggcaggtcttggggctttgggtcttggcaat
ctgatcactgaaatcactgcaagtgaggatgaagtgtctggaactgatggtgtcttggtg
gacgaagaaggttgggttaagagcactgaagatgctgtagactattctgatattactgaa
gtggcagaagatgaaagccgaagataccaccaggctatgagcagcttgcagccatcctgt
ccctcagatgatgatgatgactatgatgctgactgtgaagacattgattctaagcttatg
ccccctccacctcccccaccaggacctatgaggaaggatgatggccaggatcctgctgta
tgtgcagtatcagaagatggagatggcatcattctgccctccatcattgcctcttcctct
gcagcctcagagaaagttgaatttagtagctcttctgattcagaatccgagatgggccca
caggaaacaagacagactgaggctaaggagggcaaactcactctccctctggctgggatc
atgcagcgtgactccacaaaagtattacctagtgtcacagaactttttcctgagtttcgg
cctggcaaggtattacgcttccttcgcctctttggcccaggaaagaatgtctccatctgt
ttggcgaagtgctcggagaaagaggaagaagaagcacctgagagctgggcaccagaagaa
tctcatgagggcgaatgctctggggaccctgacttggagagaaaatcaccatgggcctat
gaatatgctcccccaccccctccagaacagtgtctgtcggatgatgagatcacgatgatg
gctcctgtggagtccaagttttcccagtcatctggagacatagacaaagttacagacacc
aagccaaaggtagctgaatggcgttacgggcctgcccggttgtggtatgacatgttgggt
gtacctgaagatggcagtgggtttgactatggcttcaaactcagaagtgcacaagatgag
ccatctacaaagccagggatgatggaaaaggatttgggggcattggaggaagcaggggat
cttctggctgatgagaacttcctgatggtgacccagctgcactgggaggatgacatcatc
tgggatggagaagacatcaaacataaaggcactaagccccagcgggccagtcttgctggc
tggcttccctccagcatgaccaggaatgccatggcctacaatgctcagcaaggttttact
gccactctggatgatgacaaaccttggtattccatcttcccaattgacaacgaggagctg
gtatatggccgttgggaagacaacattatctgggatgccttggctatgcctcgcctcttg
gagccacctgtcctgactttggatccaaacgatgagaatcttatcctggaaatacctgat
gaaaaggaagaaatgacatcaaattccccctcaaaggagaataagaaagaatcttcttta
aagaagagtcgaatccttttggggaaaacaggtgttattaaggaagagccacagcagaac
atgtcccagccggaggtgaaggacccttggaacctgtccaatgatgagttttactaccct
aagcagcagggccttcgtggcacctttggagggaacattatacagcattcgatccctgct
gtggagctccggcagcccttcttccccacccacatgggccccatcaaactccggcagttt
caccgcccacctctgaagaagtactcctttggggccctatcccagccgggtccccactcc
gtccaacccttgctgaaacacatcaagaagaaagccaaaatgagagaacaagagcgccag
gcctctgggggtggggagatgttttttatgcgcacaccccaagatctgacaggcaaagat
ggagatctgattcttgcggagtatagtgaagagaacggtcccttaatgatgcaggtcggc
atggcaaccaagataaaaaactactataaacggaaacctgggaaagaccctggtgcccca
gattgcaagtatggagaaacggtttattgccacacatctcctttcctgggctctctccac
cctggacagcttttgcaggcatttgagaacaacctctttcgtgctccaatttatcttcat
aagatgccagagacagacttcctgattattcggacacgacagggttattatattcgggag
ctggttgacatctttgttgttggccagcagtgccccttgtttgaagttcctgggcccaac
tccaaacgggcaaacacccacattagagacttcctgcaggttttcatttaccgcttattt
tggaagagtagagaccgtccacgcaggatccgtatggaggatatcaagaaagcctttcct
tctcactcagaaagtagcatccgaaagagattaaagctctgtgctgacttcaagcgcaca
gggatggactcaaactggtgggtgctgaagactgatttccgtttaccaactgaggaagaa
atcagggctatggtgtctccagagcagtgctgtgcttattatagcatgatagcagcggag
cagcgattgaaggatgctggctatggggaaaagtccttctttgctcctgaagaagaaaat
gaggaagatttccagatgaagattgatgatgaggtgcgtactgccccctggaacactaca
agggccttcattgcagccatgaagggcaagtgccttctggaagtgactggggtggcagat
cctacagggtgtggggaaggcttctcctatgtgaagattccaaacaaaccaacccagcag
aaggatgataaggaaccccagccagtgaagaagacagtcacgggaaccgatgcagatctc
cgtcgcctctctctaaaaaatgccaagcaacttctccgtaaatttggtgtgccggaggaa
gagatcaagaagctctctcggtgggaagtgatcgatgttgtacgcaccatgtcgactgaa
caggctcgctctggagaggggcccatgagtaaatttgcccgggggtcaaggttttcggtg
gctgaacatcaggaacgttacaaagaagaatgtcaacggatcttcgacttgcagaacaaa
gttttgtcatcaactgaaattctgtcaactgacaccgacagcagctctgccgaggatagt
gactttgaagaaatgggaaagaacattgagaatatgctacagaacaagaaaaccagttct
cagctatcgagagagcgggaggagcaggagcggaaggaattacagcgaatgctactgggt
gaggaaggtgccaatgacaaggaaacgggcaagaaagagaagaaggacaaaaagggactg
ttgagctctggaggctctcacaaggacgatgacacagcctctgtgaccagtcttaactcc
tcagccacgggtcgatgcctcaagatttaccgaacctttcgagacgaggatgggaaggag
tatgtcagatgtgagaccgtgaggaagcctgctgtcattgacgcctacgtacgcatacgg
acgacgaaggatgaagagttcattcggaaatttgccctgtttgatgagcaacatcgagaa
gagatgcggaaggaacggcgaaggatccaggagcaactgaggcgtctcaaaaggaaccaa
gaaaaggaaaagctcaagggtcctcctgagaagaagcccaagaaaatgaaggaacgtcct
gatttgaagctaaaatgtggagcttgtggtgccatcgggcacatgaggacaaacaagttc
tgccctctgtattaccaaaccaatgctccgccctccaaccctgtcgccatgacagaggaa
caggaggaggagctagaaaaaactgtcatccctaatgataatgaagagcttatcaaggtg
gaagggaccaagattgtcttgggcaagcagctaattgagagtgcagatgaggttagaagg
aaatcgctggttctgaagttccctaaacagcaacttcctcccaagaagaaacgacgagtt
gggaccactgttcattgtgattatttgaatcgaccccacaagtctatccatcgacgccgg
acagatcccatggtgacgttgtcatctatcctggagtccatcatcaatgacatgagagat
cttcccaatacttaccctttccacactcctgtaaatgccaaagttgtgaaggactattat
aaaatcatcacccggcccatggacctgcaaacactccgtgaaaatgtccgtaagcgcctt
tacccatcccgagaggaattccgagagcacttggaactgattgtgaaaaacagtgcaacg
tacaatgggcctaagcattcattgactcagatctctcagtcgatgctggatctctgtgat
gagaagctgaaagagaaagaagataaactggcccgcttagagaaggccattaaccccttg
ttggatgatgatgaccaggtggcattctctttcattctggacaacatcgtcacccagaag
atgatggtggttccagactcttggccatttcatcacccagtgaataagaagtttgttcca
gattattataaagtgatcatcaacccaatggatttggaaaccatccgcaaaaacatttct
aagcacaagtatcagaatcgagatgcctttctggatgatgtcaaccttattctaaccaat
agcatcaagtacaatggttcagatagtcagtacaccaaaactgctcaggagatcgtgaac
atttgtcatcagactctttctgagtacgatgaacatctgactcagcttgagaaagacatc
tgtactgctaaggaagcagctttggaagaggctgacttggaaagcttagacccaatgacc
ccagggccttatactccccagcctcctgatttgtatgatacgaacacatcccttagtatg
tctcgagatgcctcggtctaccaagatgaaagcaatatgtctgccatggacacaccaact
actaccccagagaagaggggggtacaggaagaagatgcagatgaagaggagggatctgca
caacagcctcagtctagtgtcttgtatgaagatttgcttatgtctgatgtggaggatgag
gaggaagatgctgggagtgatgacgaaggagataaccctttttcctctatccagctgagt
gagagtggcagtgattctgacatggagtctggtggaatgaggcccaaacagccccacatg
ctccaagagaacacaagaatgggcatggacaatgatgagagcatgatgtcctatgaggga
gatactgctgagacatctcacgggatggaggacagcaacatcagttatgggagctatgag
gagcctgaccccaaatcaaatactcgagatacaagctttagcagtataggtggatatgat
gtctcagaggaggaggaggaggaggaggaggaagaggaggaagaggaggaggaggaggag
caggaggaggaggacgaggaggaggacgaggaggacgaggaggacgaggaagaagaagaa
gaacagcgtggggggcccagtgtcctcagccaagtccggctgtcggaggatgaggatgac
agtgaggactgccactcaattgctgcagacagtgatttggactctgatgaatga
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integrated database retrieval system
