Monodelphis domestica (gray short-tailed opossum): 100013411
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Entry
100013411 CDS
T01031
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100013411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdo02000
]
100013411
Transporters [BR:
mdo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100013411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Rad17
AAA_15
AAA_23
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
100013411
NCBI-ProteinID:
XP_016279179
LinkDB
All DBs
Position
6:157934365..158367689
Genome browser
AA seq
1646 aa
AA seq
DB search
MSMRKQFQLLLWKNYILKKRKILSSLLEILLPLVFSVVLISLRLRSKPVNVDAIKYHPII
LDDLPSSFMERFPPGLFILAYIPKNDGVLKTIAENMVKPFKFRLLVKGYSSFEVLFKIKD
IILCAVIFDHVFQNQSKQLPSKVEYSLRFLFHQRFPNFTYREKRRERFDGWNTRLLFPLN
SFTGPRQPFENDGGLPGYFREGFLTIQHAINREIIYSSMNVSMIEQFKKINVILKRFPFP
PYVQDPFISVLEGNLSLMIMLSFLCTCIFIIRSVVQEKEKKLKEYMCIMGLSNWLHWTAW
FFVYFIILIIIILIMITLFFLKVKDNVAVLTQSDPSLVFLFLTCFAISTISFSFMISVFF
SKGDSAAELFLFFSYIHFLYIGYNYSEMSHEMKLVSCLLSNVAMSLGIKFIIFFEARGSG
IQWRHVLKISVHDRLNFMEVMVMLLVDSVLYSLVTWYVEATFPGKYGIPQPWNFFMMRSY
WLGKPHTYKEEPKDEIYTSPINPYVQDEPLDLTAGVKILNLSKVFRTGNDIKRALKNLTL
NMYEGQITVLLGHNGAGKTTTLSILTGLFPPTSGEAWISGYEISEGMVQIRKSLGLCPQH
DILFDHMTVDEHLTFYVQIKGSWNADFSDEINNILTVLGLEKKRHTVSQSLSGGMKRKLS
IGISLIGGSKVVMMDEPTSGMDPVSRRAMWDLLQQEKSKRTIVLTTHFMDEADLLGDRIA
ILAKGKLQCCGSSLFLKQKYGAGYHMTIVKKQYCLVEEIERLIYEHIPSASMESNMGAEL
SFTMPKDNISRVSKFIDSNMDLQHINRLTSRNKALEKNNIHLDGSDIFHENFNYNNAFKL
GFQQFYAMLVKKFSFTWCHWKMMLVQIIALLICITFTIKAFKISLESSKTPFLQLKLNVY
GETTVPFFISKNTRLHPNLSGYVSDAIKAEEQLPMEISYPMDDFLINQATKDCAIFDENF
LVAISFQDHKDKTTVTALFNNHAYHAAPMALAMVDNILYKLFFDSKASITTTNSPQPPPK
TDAAIERLFQGPKGHFLAITLMFGISFLVSAFAILPISERVIKSKHIQFICGLSKTNYWL
SSLLWDLLFFLFCSLLILLLLKILDEKAYIQKNHSQATLMMLMLFAWANIPLIYLMSFFF
SGIASGCAKLIIINIVLGILPFTFNSIIKEMDQSLKLFSQKTDIVFQLIPNYSLAMAFSS
LYYNYEFNRFCRSLKIGMKACQKIYQNYIPQENIYAWESLGIGKYLTSMAVCGFVYLGLL
FCIDTDFLWKMKIYFSKMFEKRKLSQQPEETPYISRDLDVEEEKMKIRNFLPELLPKIPL
IALEITKVYGHKKKKSVLAVDKVSLAIKKGECFGLLGLNGAGKTTTFKILTGDITITSGD
AFINGKSISSKRTEIKKQIGYCPQFDALLGHMTGRQLLIMYARIWGIPEQQIQSYVAEII
FDLLLETQADRLVKDYSGGNKRKLSAGIALLGKPKIIFLDEPSTGMDPVARRLLWNQVTR
AREAGKAIIITSHSMEECEALCTRLAIMVNGRFKCLGSPQHLKSKYGSGYTLLAKIKSTT
PKERNLAIQEFKIFVQTKFPGSRLKDEHQGMVHYHLPKQNLKWSKVFGILENAKNEYKLD
DYSISQVSLEQIFLSFAHLQVSLYDL
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgagaaagcagtttcaacttcttctctggaaaaattatattctaaagaaacgc
aagatcctatcaagcctcttggaaatcttactgccactggtattttctgtagttttaatt
tcacttcgtttgaggagtaaaccagtaaatgtggatgctataaaatatcatcctattatt
cttgatgatctacccagtagtttcatggaaaggtttccaccaggtttatttatcctagct
tatatccctaagaacgatggtgttttgaagacaattgctgagaatatggtaaagcccttc
aagtttcgattactagttaagggttattcttcatttgaagttttattcaagataaaagac
atcattctgtgtgcagttatttttgatcatgtcttccaaaaccaaagtaaacagctgcca
agtaaggtagagtatagcctgcgttttctcttccaccaaaggtttcctaattttacgtac
agagaaaaaagaagagaaagatttgatggatggaatacacgccttctttttccacttaat
tcattcacaggacccagacagccttttgaaaatgatggaggattgcctggatattttcga
gaaggatttctgaccatacaacatgctatcaacagagaaatcatatattcctccatgaat
gtctctatgattgagcagtttaagaaaatcaacgttattttgaagaggttcccatttcca
ccttatgttcaggacccattcatttcagtcttagagggtaatctttccctgatgatcatg
ctgagcttcctttgtacctgcatcttcatcatccgttctgttgttcaggaaaaagaaaaa
aagctgaaggagtatatgtgcatcatgggactcagcaactggctacattggactgcatgg
ttcttcgtgtattttattattctcattattattatcttaattatgatcacactcttcttt
ttgaaggtgaaagataatgtggcagtgctcacacaaagtgatccatctttggtgttttta
tttctaacatgttttgctatttccaccatctccttcagctttatgatttctgtgttcttc
agtaaaggtgacagtgctgcagagctatttctattcttctcctatatccatttcctttac
attgggtataactactctgagatgagtcatgaaatgaagctggtctcctgtctcttatca
aatgttgcaatgtcactgggaataaagttcataatcttctttgaagcaagagggtcaggt
attcaatggaggcatgtgttgaagatttccgtgcatgatcgtttgaactttatggaggtg
atggtaatgctactagttgacagtgtcttatatagcctggtgacctggtatgttgaggcc
acctttccagggaaatatggtatacctcagccttggaacttcttcatgatgcgctcctat
tggcttggaaaacctcatacttataaggaagagccaaaggatgaaatatacacatctccg
ataaacccttatgttcaggatgagcctttagacttgactgcaggagtaaaaattttgaat
ctgtccaaggtatttagaacggggaatgatattaaaagagcattaaaaaacctgacactg
aatatgtatgaggggcaaatcactgtgcttcttgggcataatggagcagggaagaccacc
accctatccatactcacaggtcttttccctcctacgagtggagaggcatggatcagtgga
tatgagatttcagagggcatggttcagatccggaaaagcctgggcttatgtccacaacat
gatatcttgtttgatcacatgacagtagatgagcaccttaccttctatgttcagattaaa
ggatcatggaatgctgatttctctgatgaaatcaataatatattgactgttcttggtctg
gagaagaagcgccacacggtttcacagtccttgagtggaggaatgaagcgcaaactctcc
ataggcatctcactcattggaggatctaaggtggtaatgatggatgagccaacatcaggt
atggatccagtttcacggcgtgccatgtgggacctccttcagcaagagaaaagtaagcgc
actattgtactgactacccactttatggatgaagctgatcttctgggagaccgcattgcc
atcctagcaaaagggaaactgcagtgctgtggctcttcacttttcctcaagcaaaaatat
ggtgcaggatatcatatgaccatagttaagaaacaatattgtcttgtagaagaaattgaa
agactgatttatgaacatataccatcggcctctatggaaagcaatatgggagctgagtta
tcatttaccatgcctaaagacaacataagcagggttagtaaattcatcgattccaacatg
gatcttcagcatatcaaccgcctaacttcgcgtaacaaagccctggagaagaataatatt
catttggatggctctgacatattccatgagaatttcaattataacaatgcgttcaaactt
ggtttccagcaattctatgccatgttggtgaagaagttttcattcacttggtgccactgg
aagatgatgttagtacagataattgctcttctgatttgtatcacattcactatcaaggcc
tttaaaatatctttggagtcatcgaaaacccccttcttacagctgaagttgaatgtgtat
ggcgaaacaactgtgcctttcttcatctctaagaatactaggctgcatccaaatctctca
ggttatgtctcagatgctattaaagctgaggaacaactgcccatggaaatttcatatcct
atggacgatttcctgattaaccaggcaacaaaagattgtgctatttttgatgaaaatttc
cttgtggcaatttcctttcaagaccataaagataaaacaactgtcactgctctcttcaat
aaccatgcttaccatgctgctcccatggccttggcaatggtggataatattctctacaag
ttgttttttgactctaaggcttccattacgaccaccaacagccctcagcctccacctaag
actgatgctgctatagagaggttattccagggccctaagggacattttcttgccattacc
ttgatgtttggaatatcatttttagttagtgcatttgctattctgccaatcagtgagcga
gtcataaagtcaaagcatatccagtttatctgtggactctctaaaacgaattactggctc
tcttccctattatgggatctcctcttcttcttgttctgcagcttgctaatactgcttctc
ctgaaaatcttggatgaaaaagcttatattcagaaaaaccactctcaagctaccttgatg
atgttaatgctgtttgcctgggctaacatccctttgatatatctaatgagcttctttttc
tctgggattgctagtgggtgtgccaagctcataattataaatatcgtcttgggaattctt
ccattcacctttaatagcatcataaaagaaatggaccaaagtttgaaactcttttcccaa
aaaaccgatattgtattccagttaataccaaattatagcctagcaatggctttctccagc
ctgtattataactatgaattcaatcggttctgtagaagtctgaaaattggtatgaaagcg
tgccaaaaaatataccaaaattatataccacaagaaaatatctacgcgtgggagtctctt
ggcattggaaagtatttgacctccatggctgtatgtggctttgtatatcttgggctcctt
ttctgcattgatacggacttcctctggaaaatgaaaatctatttctctaagatgtttgaa
aaaaggaaattgtcacagcagcctgaggagacaccttacatttccagagacctagatgtg
gaagaagagaaaatgaaaatccggaatttccttccagaactgttgcctaaaatccctctg
attgctctagaaatcacaaaggtatatggccataagaaaaaaaaatctgtccttgctgtg
gacaaggtctccctcgcaatcaagaaaggagagtgctttgggctgctgggcctcaacgga
gctgggaaaaccaccaccttcaaaatattgactggggatatcaccatcacatctggagat
gcctttatcaatggaaaaagtatctccagtaaacgcacagagataaagaaacaaattggc
tactgtcctcagtttgatgccctgctgggccacatgacaggacgacaacttttaattatg
tatgcccggatttggggcattcctgagcaacaaattcagtcgtatgtggcggagatcatc
ttcgacctgctcctggagacccaagcagacagacttgtcaaagactacagtggtggcaac
aaacgtaaactgagtgccggtatcgcccttttgggaaaacccaaaattatcttcctggat
gagccatccactggtatggaccctgtagcccggcgcctgctctggaatcaagtaaccagg
gcccgtgaggctggcaaagccataatcattacctcccacagcatggaggaatgtgaagcc
ctgtgcaccaggctggccataatggtgaatggaagattcaagtgtctgggtagcccacaa
catctcaagagcaaatatgggagtggctataccctactggccaaaattaagagcaccact
cctaaggaaagaaatttagcaattcaggagttcaaaatatttgtgcaaacaaagtttcca
ggcagtagactgaaggatgaacatcaaggaatggtccattaccacttgcccaaacagaac
cttaaatggtcaaaggtatttggcatcttggaaaatgccaaaaatgagtataaattggat
gactattccatcagtcaagtctcgctggaacaaatcttcttgagctttgctcacttacaa
gtctcactgtatgacctctaa
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