Monodelphis domestica (gray short-tailed opossum): 100013419
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Entry
100013419 CDS
T01031
Symbol
DDX1
Name
(RefSeq) DEAD-box helicase 1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdo03041
]
100013419 (DDX1)
03016 Transfer RNA biogenesis [BR:
mdo03016
]
100013419 (DDX1)
Enzymes [BR:
mdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100013419 (DDX1)
Spliceosome [BR:
mdo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100013419 (DDX1)
Transfer RNA biogenesis [BR:
mdo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100013419 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
SNF2-rel_dom
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
100013419
NCBI-ProteinID:
XP_001363606
Ensembl:
ENSMODG00000010275
UniProt:
F6VNU2
LinkDB
All DBs
Position
1:745145409..745176802
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTVKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRSTKGVMKGKYYYEVSCHDQGLCRVGWSASQASLDLGTDKFGFGFGGTGKKSHNKQFD
GYGEEFTMHDTIGCYLDIDKGQVKFSKNGKDLGLAFEIPAHLKNQALFAACVLKNAELKF
NFGEDEFKFPPKDGFVGLCKASDGHIVKSQHTGSAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSILEQGVDIVVGTPGRLDDLVSTGKLN
LSQIRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDRLWERLGKTHIRTDEVHAKDNTRPGAN
SPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAVSLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
DIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGTYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctcagagatgggcgttatgcccgagattgctcaagccgtggaggagatg
gactggctcctcccaactgatatccaggctgagtccatcccactgatcctaggaggaggt
gatgtgcttatggctgcagaaacaggaagcgggaagactggtgctttcagcattccagtc
atccagatagtttatgagactctcaaggaccagcaggagggcaagaaagggaagacgaca
gtgaaaactggagcctcagtgcttaacaaatggcagatgaacccatatgaccgaggatcg
gcttttgccataggatctgacggtctgtgttgccagagccgagaagtgaaggagtggcac
gggtgtaggtccacgaaaggcgtgatgaaaggcaaatactactacgaggtgtcctgccac
gaccaagggctgtgccgagtcggctggtcggcttcccaggcctccctcgatctgggcacg
gacaagtttggctttggctttggcggaaccgggaagaaatcccacaacaagcagtttgat
ggttatggagaggagttcaccatgcatgacacgatcggctgctacctggatatcgacaag
gggcaggtcaagttttccaaaaatggaaaagacctgggcctggcgttcgaaataccggcg
cacctgaagaaccaagccctctttgctgcgtgcgtcttgaagaatgcggaactgaaattt
aactttggggaagacgaatttaagtttccccccaaagatgggtttgtcggtctctgcaag
gcttccgacggccacatcgtgaaatctcagcacacaggaagcgcccaggtggcccagacc
aagttcctgcccaacgctccgaaagcgctcatcgtggagccgtcccgcgagctggccgag
cagaccttgaacaacgtcaagcagttcaagaaatacgtcgataacccgaagctaagggag
ctcctgatcatcggtggggtggccgcccgggatcagctctctatcctggaacaaggggtg
gacatagtggtcgggactccaggaaggctggacgacttggtgtccactggcaagctcaac
ctatcccagatccgcttcctggttctggacgaggctgacgggcttctttcccagggctac
tcggacttcatcaacaggatccacaaccagattcctcagatcacctctgatggcaaaaga
ctgcaggtcatcgtctgctcggccactctgcactcgttcgacgtcaagaagctttcggaa
aagatcatgcatttcccaacctgggtggatctgaaaggagaggattctgtccccgaaacc
gtgcaccatgttgtggttcccgtgaaccccaaaacggaccggctgtgggagaggctgggc
aaaactcacatccggacggacgaagtacacgcgaaagataacacgaggccaggcgcaaac
agccccgagatgtggtccgaagccatcaagatcctgaagggggagtacacggtgcgggcc
atcaaggagcacaagatggaccaggccatcatcttctgccggaccaagatcgactgcgat
aacctggagcagtacttcatgcagcagggcggaggtccggacaagaagggacaccagttc
tcctgcgtttgtcttcacggcgacaggaagcctcatgagaggaagcagaacttggagaga
tttaagaagggagacgttcggtttctgatctgcaccgacgtggccgccagagggatcgac
atccacggggttccttacgtcatcaacgtgaccctgcccgacgaaaagcagaactacgtg
catcggatcggccgggtgggccgagcggagaggatgggtctggccgtgtccctggtggcg
acggagaaggagaaggtctggtaccacgtctgcagcagccgggggaagggatgctataac
accaggctgaaggaagacggcggctgcaccatctggtacaacgagatgcagctgctgtcc
gacatcgaggaacacctgaactgcaccatctcccaagtggagcccgacatcaaagtcccc
gtggacgagtttgatggcaaagtgacctacgggcagaagagagccgccggaggtgggacg
tacaagggccacgtggacatcctggcgcccaccgtgcaggagctggcggccctggagaag
gaggcccagacgtcgttcctgcacctcggctacctgcccaaccagctcttcaggaccttc
tga
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