Monodelphis domestica (gray short-tailed opossum): 100014127
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Entry
100014127 CDS
T01031
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100014127 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100014127 (EXOSC10)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100014127 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
GloB_C
Motif
Other DBs
NCBI-GeneID:
100014127
NCBI-ProteinID:
XP_001364197
Ensembl:
ENSMODG00000011194
UniProt:
F6T6Q0
LinkDB
All DBs
Position
4:366318514..366358565
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AA seq
888 aa
AA seq
DB search
MAAPSVKGARPGPEAAATPAAAEPSGMMVLPGFKDADSFVKFALGSVLAATKASNGLPQA
GDEYDFYRSFPGFRAFCETQGDRLLQCMSKVMQYHGCRSHIKDRSKVTELEDKFDLLVDS
NDVILERVGILLDEASGLNKNQQPILPAGMQVPQTIVSSWNRKAGEYNKKKQSETFRLLH
AKNIIRPQLKFREKVDNSNTPFVPKIFIKPNAQKPLAQALTKERRERQERPEDLDVPPAL
ADFLYQQRTQQIEQDMFAHPYQYELDHFAIPDEVLQKPQIQMYKPVGETPCHFVTTLDAL
VELNEKLLNCKDFGVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDLYILNESFT
DPSIVKVFHGADMDIEWLQKDFGLYVVNMFDTHQAARILNLGRHSLDHLLKLYCNVESNK
QYQLADWRIRPLPEEMFNYARHDTHYLLYIYDKMRSDLWDRANGQPAQLQVVWQRSKDIC
LKRFIKPIFMEDSYLELYRKQKKHLNTQQLTAFQLLYSWRDRTARREDESYGYVLPNHMM
LKIAEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSEVASGVKKNRPQS
APERIENALFGPHDYSRAPPDDYLNVTATGPAPLQKRATLFSDKNENETMSDVGCLIATA
VITLFSEPSAGEENEGRLTAAQKKAQSIMESFENPFRMYLPSEENHAYVSQSAKFDPMSK
IYEISNRWKLASQVQIKKEAQEALRKKAEQTAAREQAKEEYKAATQQVISVRQQAVLENA
TKKRERMGSEPETPEPKQEKKRLKASQPPQEQEPPKEFTPYDYSKSDFKAFSGNSKAKQS
AQFDPNKQDPPGKKCATVGKPKQPAGNRSKSFVTGKSERGFRYSWPKR
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcccagcgttaagggagcgagacccgggcctgaagcggcggcgacgccggcg
gctgccgagccgagcgggatgatggtgctgccagggttcaaggacgcggatagcttcgta
aagtttgctcttggatctgtgctggctgctactaaagcttccaatgggctgccacaggct
ggagatgagtatgatttttaccgaagttttcctggcttccgggcattttgtgaaacacaa
ggagacaggttacttcagtgtatgagcaaggtcatgcagtatcacggctgccgtagccac
attaaggaccgaagtaaagtgactgaattggaggacaagtttgatttgctggttgattcc
aatgatgttattcttgaaagagttggtattctcttagatgaagcatcaggattaaacaag
aatcagcagcctatcctccccgctggaatgcaggtccctcaaacaattgtgtctagctgg
aatcgtaaggcaggagaatataacaagaaaaaacagtctgaaaccttccgattgcttcat
gccaagaacatcattcgacctcagctcaagtttcgagaaaaggtggataattccaacacg
ccgtttgtccccaaaatcttcatcaagccaaatgctcagaaacccttggcacaggcactc
accaaagaaaggcgggagcgccaggaacgccctgaggacttggacgtgccgcctgcactg
gcagattttctctaccaacagagaactcagcagattgagcaggatatgtttgctcatccc
tatcagtatgaactcgatcactttgccataccagatgaagtccttcagaagccacagatt
cagatgtacaaacctgtaggagaaacaccctgccattttgtaaccaccctcgacgcactc
gtggaactcaatgaaaaactcctgaattgtaaagactttggtgtagatttggagcaccac
tcttataggagcttcctaggtttgacatgcctcatgcagatttcaacccgaacagaagat
ttcattattgataccctggaacttcgaagtgacctatatattctcaatgagagcttcaca
gatccatccatcgttaaggtcttccatggtgctgatatggacatcgaatggctgcagaaa
gactttgggctgtatgtggtgaacatgtttgatacccaccaagcagctcgcatccttaac
cttggcagacactcactggatcacttattgaaactctattgcaatgtggaatcaaataag
caatatcaattggctgactggaggataagacctttacccgaggaaatgtttaactacgca
cgccatgatactcactacctcctctacatttacgataagatgcgctcagatctgtgggac
cgagcaaatgggcagccagctcagttgcaggtggtgtggcagcggagcaaggacatttgc
ctcaagaggttcatcaaaccgatattcatggaagattcttacctggagctgtatagaaag
cagaagaagcacctcaacacccagcagctcacagcctttcagttgctttactcttggagg
gacagaacagcccggagggaggatgagagttatggctacgtcctacccaatcacatgatg
ctgaagatagctgaagagctgcccaaggaacctcagggcattattgcttgctgcaacccc
gtgcctcctctcgtgcggcagcaaataaacgaaatgcaccttctcatccagcaggcccga
gagatgcctctgctcaagtctgaagttgcatctggagtgaagaagaacagaccccagtct
gcacctgagagaatagaaaatgccttatttggtcctcatgattattcccgggctcctcca
gatgattatctaaatgtcacagcaacaggacctgcaccacttcagaagagggcaaccctc
ttctctgacaaaaatgaaaatgagaccatgtcagatgttggctgccttattgctactgct
gtcatcacattattcagtgagcctagtgctggtgaagagaatgaagggaggctgactgct
gcccagaagaaggcccagagcatcatggagtcctttgaaaatccattcaggatgtatctg
ccctcagaagagaaccacgcttatgtctcacaatcagcaaagtttgacccaatgtcgaaa
atctatgaaatcagcaatcgttggaagctggcaagccaggtacagattaaaaaagaagcc
caggaagcactaagaaaaaaagctgagcagacagctgcccgggaacaggccaaggaagaa
tataaagcagccacccagcaggtcatctcagtccggcagcaagctgtgctagaaaatgct
actaagaagagggagagaatggggagcgagccagagaccccagagccaaaacaagagaag
aaaaggctcaaagcatcccagcctccccaagagcaggagccgcctaaggagttcaccccc
tacgactacagcaagtcggacttcaaagccttttctggaaacagcaaagccaagcagtcg
gctcagtttgatccaaataagcaggacccgcctggcaagaaatgtgctacagtgggcaaa
ccgaagcagccagcagggaacaggagcaagtctttcgtgactggaaaatcagagagaggt
ttcaggtacagctggcctaagagatag
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